ggKbase home page

L2_013_037G1_scaffold_251

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_037G1_scaffold_251_1
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..514
DNA (513bp) protein (171aa)
Uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO50282.1}; Flags: Fragment;; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L2_013_037G1_scaffold_251_2
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


673..1176
DNA (504bp) protein (168aa)
30S ribosomal protein S12 n=3 Tax=Clostridiales RepID=H1LYG5_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
SSU ribosomal protein S12P
L2_013_037G1_scaffold_251_3
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1304..1798
DNA (495bp) protein (165aa)
30S ribosomal protein S7 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYG4_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
30S ribosomal protein S7
L2_013_037G1_scaffold_251_4
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1813..3930
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LJT8_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
elongation factor G
L2_013_037G1_scaffold_251_5
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4067..5266
DNA (1200bp) protein (400aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Lachnoanaerobaculum saburreum RepID=E6LJT9_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
L2_013_037G1_scaffold_251_6
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5386..6219)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO50302.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L2_013_037G1_scaffold_251_7
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6255..8084)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO50301.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Protein of unknown function (DUF1576).
L2_013_037G1_scaffold_251_8
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8475..9065
DNA (591bp) protein (197aa)
Uracil-DNA glycosylase family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF8_9FIRM
Uracil-DNA glycosylase family protein {ECO:0000313|EMBL:EHO50300.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
uracil DNA glycosylase superfamily protein
L2_013_037G1_scaffold_251_9
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9119..10186
DNA (1068bp) protein (356aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF7_9FIRM
L2_013_037G1_scaffold_251_10
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10187..13369
DNA (3183bp) protein (1061aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDF5_9CLOT
carbamoyl-phosphate synthase large subunit
L2_013_037G1_scaffold_251_11
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13430..13777)
DNA (348bp) protein (116aa)
Cell wall-binding repeat protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LKC4_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:EFU77764.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
pspC2; surface protein PspC
L2_013_037G1_scaffold_251_12
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14039..15973
DNA (1935bp) protein (645aa)
Thiamine pyrophosphate enzyme, TPP binding domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF2_9FIRM
Thiamine pyrophosphate enzyme, TPP binding domain protein {ECO:0000313|EMBL:EHO50294.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
thiamine pyrophosphate domain-containing TPP-binding protein
L2_013_037G1_scaffold_251_13
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15977..16915
DNA (939bp) protein (313aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF1_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EHO50293.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Nucleoside-diphosphate-sugar epimerases
L2_013_037G1_scaffold_251_14
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16932..18047
DNA (1116bp) protein (372aa)
Methyltransferase domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LYF0_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EHO50292.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
C-methyltransferase
L2_013_037G1_scaffold_251_15
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18692..26341
DNA (7650bp) protein (2550aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XDM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ69447.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
Displaying 15 items

View Taxonomy