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L2_013_043G1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 336 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_4_1
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..1430
DNA (1428bp) protein (476aa)
Resolvase, N-terminal domain protein n=3 Tax=Mobiluncus RepID=C2KNU8_9ACTO
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFL93994.1}; TaxID=585198 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii subsp. curtisii ATCC 35241.;"
recombinase
L2_013_043G1_scaffold_4_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2319..2690
DNA (372bp) protein (124aa)
UPI0003D6002F related cluster n=1 Tax=unknown RepID=UPI0003D6002F
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI83328.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Putative transcriptional regulator, GntR-family
L2_013_043G1_scaffold_4_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2683..3492
DNA (810bp) protein (270aa)
UPI0003D5C703 related cluster n=1 Tax=unknown RepID=UPI0003D5C703
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI83329.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L2_013_043G1_scaffold_4_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3489..4322
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B52FCB
Uncharacterized protein {ECO:0000313|EMBL:ETI83330.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_4_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4454..4636)
DNA (183bp) protein (61aa)
UPI0003D68318 related cluster n=1 Tax=unknown RepID=UPI0003D68318
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L32
L2_013_043G1_scaffold_4_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4855..5484
DNA (630bp) protein (210aa)
UPI0003D68BE9 related cluster n=1 Tax=unknown RepID=UPI0003D68BE9
Uncharacterized protein {ECO:0000313|EMBL:ETI83332.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_4_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5894..6829
DNA (936bp) protein (312aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5BFF7 related cluster n=1 Tax=unknown RepID=UPI0003D5BFF7
cysteine synthase
L2_013_043G1_scaffold_4_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6838..7422
DNA (585bp) protein (195aa)
serine O-acetyltransferase (EC:2.3.1.30)
UPI0003D65574 related cluster n=1 Tax=unknown RepID=UPI0003D65574
Serine acetyltransferase {ECO:0000313|EMBL:ETI83334.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_4_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7675..8730
DNA (1056bp) protein (352aa)
UPI0003D67085 related cluster n=1 Tax=unknown RepID=UPI0003D67085
Uncharacterized protein {ECO:0000313|EMBL:ETI83335.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_4_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8817..10094
DNA (1278bp) protein (426aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6848E related cluster n=1 Tax=unknown RepID=UPI0003D6848E
aminopeptidase I zinc metalloprotease
L2_013_043G1_scaffold_4_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10362..11495
DNA (1134bp) protein (378aa)
UPI0003D6641A related cluster n=1 Tax=unknown RepID=UPI0003D6641A
Uncharacterized protein {ECO:0000313|EMBL:ETI83337.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_4_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11483..12514
DNA (1032bp) protein (344aa)
UPI0003D6320A related cluster n=1 Tax=unknown RepID=UPI0003D6320A
Uncharacterized protein {ECO:0000313|EMBL:ETI83338.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_013_043G1_scaffold_4_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12511..13260
DNA (750bp) protein (250aa)
UPI0003D62394 related cluster n=1 Tax=unknown RepID=UPI0003D62394
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI83339.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_013_043G1_scaffold_4_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13257..14063
DNA (807bp) protein (269aa)
UPI0003D6846A related cluster n=1 Tax=unknown RepID=UPI0003D6846A
Uncharacterized protein {ECO:0000313|EMBL:ETI83340.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter
L2_013_043G1_scaffold_4_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14054..14968
DNA (915bp) protein (305aa)
UPI0003D653CA related cluster n=1 Tax=unknown RepID=UPI0003D653CA
NMT1/THI5 like protein {ECO:0000313|EMBL:ETI83341.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
myristoyl transferase
L2_013_043G1_scaffold_4_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15048..16091)
DNA (1044bp) protein (348aa)
UPI0003D66207 related cluster n=1 Tax=unknown RepID=UPI0003D66207
Uncharacterized protein {ECO:0000313|EMBL:ETI83342.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tellurium resistance protein TerC
L2_013_043G1_scaffold_4_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16219..18825)
DNA (2607bp) protein (869aa)
UPI0003D6855D related cluster n=1 Tax=unknown RepID=UPI0003D6855D
Uncharacterized protein {ECO:0000313|EMBL:ETI83343.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
P-type HAD superfamily ATPase
L2_013_043G1_scaffold_4_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18822..20915)
DNA (2094bp) protein (698aa)
UPI0003D6880D related cluster n=1 Tax=unknown RepID=UPI0003D6880D
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
excinuclease ABC subunit B
L2_013_043G1_scaffold_4_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21178..21699
DNA (522bp) protein (174aa)
nitroreductase n=1 Tax=Varibaculum cambriense RepID=UPI0003B65C49
Nitroreductase {ECO:0000313|EMBL:ETI83345.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nitroreductase
L2_013_043G1_scaffold_4_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21721..22056)
DNA (336bp) protein (112aa)
UPI0003D68564 related cluster n=1 Tax=unknown RepID=UPI0003D68564
Uncharacterized protein {ECO:0000313|EMBL:ETI83346.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid stabilization system
L2_013_043G1_scaffold_4_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22057..22350)
DNA (294bp) protein (98aa)
UPI0003D5E589 related cluster n=1 Tax=unknown RepID=UPI0003D5E589
Uncharacterized protein {ECO:0000313|EMBL:ETI83347.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
addiction module antitoxin, RelB/DinJ family
L2_013_043G1_scaffold_4_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22743..22949)
DNA (207bp) protein (69aa)
UPI0003D5F9FE related cluster n=1 Tax=unknown RepID=UPI0003D5F9FE
Uncharacterized protein {ECO:0000313|EMBL:ETI83348.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_4_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23243..24667)
DNA (1425bp) protein (475aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pyruvate kinase (EC:2.7.1.40)
UPI0003D5919D related cluster n=1 Tax=unknown RepID=UPI0003D5919D
L2_013_043G1_scaffold_4_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24743..25615)
DNA (873bp) protein (291aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5C6EA related cluster n=1 Tax=unknown RepID=UPI0003D5C6EA
prolipoprotein diacylglyceryl transferase
L2_013_043G1_scaffold_4_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25627..26469)
DNA (843bp) protein (281aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
UPI0003D68F54 related cluster n=1 Tax=unknown RepID=UPI0003D68F54
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:ETI83351.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_4_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26523..26900)
DNA (378bp) protein (126aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
UPI0003D5D692 related cluster n=1 Tax=unknown RepID=UPI0003D5D692
L2_013_043G1_scaffold_4_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26897..27667)
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5E526 related cluster n=1 Tax=unknown RepID=UPI0003D5E526
Imidazole glycerol phosphate synthase cyclase subunit
L2_013_043G1_scaffold_4_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27812..28864)
DNA (1053bp) protein (351aa)
UPI0003D5B93E related cluster n=1 Tax=unknown RepID=UPI0003D5B93E
Uncharacterized protein {ECO:0000313|EMBL:ETI83354.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_4_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28861..30243)
DNA (1383bp) protein (461aa)
UPI0003D612AC related cluster n=1 Tax=unknown RepID=UPI0003D612AC
Uncharacterized protein {ECO:0000313|EMBL:ETI83355.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Pup--protein ligase
L2_013_043G1_scaffold_4_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30247..30429)
DNA (183bp) protein (61aa)
UPI0003D6017C related cluster n=1 Tax=unknown RepID=UPI0003D6017C
Uncharacterized protein {ECO:0000313|EMBL:ETI83356.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
Displaying items 1-30 of 336 in total

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