ggKbase home page

L2_013_043G1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_29_1
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(91..486)
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WK35_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV54267.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_2
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(531..1019)
DNA (489bp) protein (163aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=3 Tax=Eggerthella RepID=C8WK36_EGGLE
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV54268.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_3
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1260..1697)
DNA (438bp) protein (146aa)
Protein involved in biosynthesis of molybdopterin n=2 Tax=Eggerthella RepID=C8WK37_EGGLE
molybdopterin biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:KGI75239.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_013_043G1_scaffold_29_4
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2387..3742
DNA (1356bp) protein (452aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Diaminopimelate decarboxylase n=3 Tax=Eggerthella RepID=C8WK38_EGGLE
diaminopimelate decarboxylase
L2_013_043G1_scaffold_29_5
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3759..5042
DNA (1284bp) protein (428aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Homoserine dehydrogenase n=1 Tax=Clostridium difficile F501 RepID=T4BCU5_CLODI
Homoserine dehydrogenase
L2_013_043G1_scaffold_29_6
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5330..5746
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HLB4_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV54273.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_7
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5757..6197
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=3 Tax=Eggerthella RepID=C8WK42_EGGLE
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV54274.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_8
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6200..7057
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X9H1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75233.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L2_013_043G1_scaffold_29_9
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7050..7850
DNA (801bp) protein (267aa)
Heat shock protein DnaJ domain protein n=3 Tax=Eggerthella RepID=C8WK44_EGGLE
heat shock protein DnaJ domain-containing protein
DnaJ domain protein {ECO:0000313|EMBL:EGC89963.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_043G1_scaffold_29_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8071..9873
DNA (1803bp) protein (601aa)
Chaperone protein DnaK n=2 Tax=Eggerthella RepID=C8WK45_EGGLE
2-alkenal reductase
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_11
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10172..10852
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Orotate phosphoribosyltransferase n=3 Tax=Eggerthella RepID=C8WK46_EGGLE
pyrE; orotate phosphoribosyltransferase
L2_013_043G1_scaffold_29_12
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10973..12646)
DNA (1674bp) protein (558aa)
FAD binding domain-containing protein n=2 Tax=Eggerthella RepID=E5X9H5_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGC90047.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L2_013_043G1_scaffold_29_13
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12801..14297
DNA (1497bp) protein (499aa)
Transcriptional regulator, LuxR family n=3 Tax=Eggerthella RepID=C8WKH3_EGGLE
LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KGI75322.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L2_013_043G1_scaffold_29_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14448..15116
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=3 Tax=Eggerthella RepID=C8WKH4_EGGLE
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ACV54281.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_15
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15165..15554)
DNA (390bp) protein (130aa)
Fic/DOC family protein n=2 Tax=Eggerthella RepID=E5X9H8_9ACTN
Death-on-curing family protein {ECO:0000313|EMBL:EGC90100.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
death-on-curing family protein
L2_013_043G1_scaffold_29_16
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15551..15781)
DNA (231bp) protein (77aa)
Prevent-host-death family protein n=3 Tax=Eggerthella RepID=C8WKH6_EGGLE
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:EGC90202.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_043G1_scaffold_29_17
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15892..16104)
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WKH7_EGGLE
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EGC90334.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_043G1_scaffold_29_18
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16097..17113)
DNA (1017bp) protein (339aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Homoserine O-succinyltransferase n=2 Tax=Bacteria RepID=C8WKH8_EGGLE
homoserine O-succinyltransferase
L2_013_043G1_scaffold_29_19
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17257..18537
DNA (1281bp) protein (427aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ACV54286.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ACV54286.1};; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WKH9_EGGLE
O-acetylhomoserine/O-acetylserine sulfhydrylase
L2_013_043G1_scaffold_29_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18613..19071
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WKI0_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV54287.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_21
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19263..20765
DNA (1503bp) protein (501aa)
Uncharacterized protein n=3 Tax=Eggerthella RepID=C8WKI1_EGGLE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC90159.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_043G1_scaffold_29_22
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20831..22489
DNA (1659bp) protein (553aa)
Oxidoreductase molybdopterin binding n=2 Tax=Eggerthella RepID=C8WKI2_EGGLE
molybdopterin binding oxidoreductase
Oxidoreductase molybdopterin binding domain protein {ECO:0000313|EMBL:EGC90285.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L2_013_043G1_scaffold_29_23
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22501..23313
DNA (813bp) protein (271aa)
Oxidoreductase molybdopterin binding n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WKI3_EGGLE
molybdopterin binding oxidoreductase
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:ACV54290.1}; Flags: Precursor;; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_043G1_scaffold_29_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23324..23602
DNA (279bp) protein (93aa)
Mo-co oxidoreductase dimerization domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BR25_CLODI
Mo-co oxidoreductase dimerization domain protein {ECO:0000313|EMBL:EQI11715.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
molybdopterin binding oxidoreductase
L2_013_043G1_scaffold_29_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23671..24093)
DNA (423bp) protein (141aa)
Flavodoxin n=1 Tax=Clostridium difficile F501 RepID=T4BUY0_CLODI
Flavodoxin {ECO:0000313|EMBL:EQI11728.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
flavodoxin
L2_013_043G1_scaffold_29_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24213..24917)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BUX6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI11723.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_013_043G1_scaffold_29_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25234..25656
DNA (423bp) protein (141aa)
6-pyruvoyl tetrahydropterin synthase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BR71_CLODI
6-pyruvoyl tetrahydropterin synthase family protein {ECO:0000313|EMBL:EQI11765.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
preQ(0) biosynthesis protein QueD
L2_013_043G1_scaffold_29_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25773..27056
DNA (1284bp) protein (428aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BV03_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQI11753.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
diguanylate cyclase
L2_013_043G1_scaffold_29_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27067..28410)
DNA (1344bp) protein (448aa)
Bacterial regulatory s, luxR family protein n=1 Tax=Clostridium difficile F501 RepID=T4BVA1_CLODI
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:EQI11754.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
LuxR family transcriptional regulator
L2_013_043G1_scaffold_29_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28751..30418
DNA (1668bp) protein (556aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Clostridium difficile F501 RepID=T4BRW9_CLODI
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EQI11736.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Displaying items 1-30 of 159 in total

View Taxonomy