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L2_013_043G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_61_1
unknown

Not on your lists

comp(3..611)
DNA (609bp) protein (203aa)

This feature has no annotations

L2_013_043G1_scaffold_61_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1087..1710
DNA (624bp) protein (208aa)
UPI0003D61778 related cluster n=1 Tax=unknown RepID=UPI0003D61778
Putative phosphate transport regulator {ECO:0000313|EMBL:ETI82134.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_61_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1714..2760
DNA (1047bp) protein (349aa)
UPI0003D63558 related cluster n=1 Tax=unknown RepID=UPI0003D63558
Uncharacterized protein {ECO:0000313|EMBL:ETI82133.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pitA; PiT family inorganic phosphate transporter
L2_013_043G1_scaffold_61_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2775..3248
DNA (474bp) protein (158aa)
UPI0003D5A9F9 related cluster n=1 Tax=unknown RepID=UPI0003D5A9F9
Uncharacterized protein {ECO:0000313|EMBL:ETI82132.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_61_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3408..5420
DNA (2013bp) protein (671aa)
UPI0003D63E4B related cluster n=1 Tax=unknown RepID=UPI0003D63E4B
Uncharacterized protein {ECO:0000313|EMBL:ETI82131.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ferrous iron transporter FeoB
L2_013_043G1_scaffold_61_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5642..5908
DNA (267bp) protein (89aa)
UPI0003D631DA related cluster n=1 Tax=unknown RepID=UPI0003D631DA
FeoA protein {ECO:0000313|EMBL:ETI82129.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
FeoA domain.
L2_013_043G1_scaffold_61_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6176..6892)
DNA (717bp) protein (239aa)
UPI0003D6487A related cluster n=1 Tax=unknown RepID=UPI0003D6487A
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L1
L2_013_043G1_scaffold_61_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6972..7406)
DNA (435bp) protein (145aa)
UPI0003D66304 related cluster n=1 Tax=unknown RepID=UPI0003D66304
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplK; 50S ribosomal protein L11
L2_013_043G1_scaffold_61_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7569..8477)
DNA (909bp) protein (303aa)
UPI0003D6382A related cluster n=1 Tax=unknown RepID=UPI0003D6382A
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcription antitermination protein
L2_013_043G1_scaffold_61_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8492..8740)
DNA (249bp) protein (83aa)
UPI0003D5D5E6 related cluster n=1 Tax=unknown RepID=UPI0003D5D5E6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
preprotein translocase subunit SecE
L2_013_043G1_scaffold_61_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9110..10327
DNA (1218bp) protein (406aa)
aspC; aspartate transaminase (EC:2.6.1.1)
UPI0003D62C76 related cluster n=1 Tax=unknown RepID=UPI0003D62C76
Uncharacterized protein {ECO:0000313|EMBL:ETI82124.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_61_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10423..10626
DNA (204bp) protein (68aa)
UPI0003D692E2 related cluster n=1 Tax=unknown RepID=UPI0003D692E2
Uncharacterized protein {ECO:0000313|EMBL:ETI82123.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_043G1_scaffold_61_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10619..12439
DNA (1821bp) protein (607aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D60888 related cluster n=1 Tax=unknown RepID=UPI0003D60888
histidine kinase
L2_013_043G1_scaffold_61_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12443..13114
DNA (672bp) protein (224aa)
UPI0003D66C50 related cluster n=1 Tax=unknown RepID=UPI0003D66C50
Two-component system response regulator {ECO:0000313|EMBL:ETI82121.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
two-component system response regulator
L2_013_043G1_scaffold_61_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13226..15388
DNA (2163bp) protein (721aa)
UPI0003D63B74 related cluster n=1 Tax=unknown RepID=UPI0003D63B74
Uncharacterized protein {ECO:0000313|EMBL:ETI82120.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_043G1_scaffold_61_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15615..16352
DNA (738bp) protein (246aa)
UPI0003D5A08D related cluster n=1 Tax=unknown RepID=UPI0003D5A08D
Uncharacterized protein {ECO:0000313|EMBL:ETI82119.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycerophosphoryl diester phosphodiesterase
L2_013_043G1_scaffold_61_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16470..17819
DNA (1350bp) protein (450aa)
UPI0003D666FD related cluster n=1 Tax=unknown RepID=UPI0003D666FD
Uncharacterized protein {ECO:0000313|EMBL:ETI82118.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major facilitator superfamily protein
L2_013_043G1_scaffold_61_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17905..19176)
DNA (1272bp) protein (424aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5A66A related cluster n=1 Tax=unknown RepID=UPI0003D5A66A
UDP-N-acetylenolpyruvoylglucosamine reductase
L2_013_043G1_scaffold_61_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19186..20187)
DNA (1002bp) protein (334aa)
UPI0003D597E6 related cluster n=1 Tax=unknown RepID=UPI0003D597E6
Uncharacterized protein {ECO:0000313|EMBL:ETI82116.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
deoR2; DeoR family transcriptional regulator
L2_013_043G1_scaffold_61_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20376..21197
DNA (822bp) protein (274aa)
UPI0003D6936C related cluster n=1 Tax=unknown RepID=UPI0003D6936C
MIP family glycerol uptake facilitator protein GlpF {ECO:0000313|EMBL:ETI82115.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major intrinsic protein
L2_013_043G1_scaffold_61_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21257..22783
DNA (1527bp) protein (509aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glpK; glycerol kinase (EC:2.7.1.30)
UPI0003D66CD0 related cluster n=1 Tax=unknown RepID=UPI0003D66CD0
L2_013_043G1_scaffold_61_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23000..24361)
DNA (1362bp) protein (454aa)
UPI0003D6349F related cluster n=1 Tax=unknown RepID=UPI0003D6349F
Uncharacterized protein {ECO:0000313|EMBL:ETI82113.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
peptidase U32
L2_013_043G1_scaffold_61_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24652..25584)
DNA (933bp) protein (311aa)
UPI0003D6898E related cluster n=1 Tax=unknown RepID=UPI0003D6898E
Uncharacterized protein {ECO:0000313|EMBL:ETI82112.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_013_043G1_scaffold_61_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25577..26584)
DNA (1008bp) protein (336aa)
UPI0003D68861 related cluster n=1 Tax=unknown RepID=UPI0003D68861
Uncharacterized protein {ECO:0000313|EMBL:ETI82111.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_013_043G1_scaffold_61_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26829..28118)
DNA (1290bp) protein (430aa)
UPI0003D615F9 related cluster n=1 Tax=unknown RepID=UPI0003D615F9
Uncharacterized protein {ECO:0000313|EMBL:ETI82110.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter substrate-binding protein
L2_013_043G1_scaffold_61_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28307..29110)
DNA (804bp) protein (268aa)
UPI0003D66804 related cluster n=1 Tax=unknown RepID=UPI0003D66804
Uncharacterized protein {ECO:0000313|EMBL:ETI82109.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nucleotidyl transferase
L2_013_043G1_scaffold_61_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29362..30543
DNA (1182bp) protein (394aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D650D1 related cluster n=1 Tax=unknown RepID=UPI0003D650D1
N-acetylglucosamine-6-phosphate deacetylase
L2_013_043G1_scaffold_61_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30611..31297)
DNA (687bp) protein (229aa)
UPI0003D695A0 related cluster n=1 Tax=unknown RepID=UPI0003D695A0
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETI82107.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LuxR family transcriptional regulator
L2_013_043G1_scaffold_61_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31278..32684)
DNA (1407bp) protein (469aa)
UPI0003D62D78 related cluster n=1 Tax=unknown RepID=UPI0003D62D78
Sensor histidine kinase {ECO:0000313|EMBL:ETI82106.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
histidine kinase
L2_013_043G1_scaffold_61_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32817..33515
DNA (699bp) protein (233aa)
UPI0003D63316 related cluster n=1 Tax=unknown RepID=UPI0003D63316
Uncharacterized protein {ECO:0000313|EMBL:ETI82105.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter
Displaying items 1-30 of 95 in total

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