ggKbase home page

L2_013_043G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_63_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60..3008)
DNA (2949bp) protein (983aa)
Type III restriction enzyme {ECO:0000313|EMBL:KFI98106.1}; EC=3.1.21.5 {ECO:0000313|EMBL:KFI98106.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Type III restriction enzyme n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPK4_9BIFI
restriction endonuclease
L2_013_043G1_scaffold_63_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3020..3670)
DNA (651bp) protein (217aa)
Adenine specific DNA methylase Mod n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU45_BIFLJ
DNA methyltransferase
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:ADH00401.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_043G1_scaffold_63_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3652..4962)
DNA (1311bp) protein (437aa)
Adenine specific DNA methylase Mod n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HAE8_9BIFI
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:CDB23197.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
DNA methyltransferase
L2_013_043G1_scaffold_63_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4959..5675)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCK2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98107.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_013_043G1_scaffold_63_5
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5672..9055)
DNA (3384bp) protein (1128aa)
Helicase domain-containing protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNE7_9BIFI
Helicase domain-containing protein {ECO:0000313|EMBL:KFI98108.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
helicase
L2_013_043G1_scaffold_63_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9086..10432
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAX9_BIFLI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29345.1}; Uncharacterized protein {ECO:0000313|EMBL:KFI66446.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L2_013_043G1_scaffold_63_7
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10639..13104
DNA (2466bp) protein (822aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EAY1_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KFI90375.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
hypothetical protein
L2_013_043G1_scaffold_63_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13170..13367
DNA (198bp) protein (66aa)
Gp2 phage-like protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MHZ0_BIFBI
Gp2 phage-like protein {ECO:0000313|EMBL:EKF16747.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_013_043G1_scaffold_63_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13386..13667)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 6119V5 RepID=I4MDZ6_GARVA
Addiction module toxin component YafQ {ECO:0000313|EMBL:KFI98117.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_013_043G1_scaffold_63_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13660..13920)
DNA (261bp) protein (87aa)
DNA-damage-inducible protein J n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7P7_BIFAB
DNA-damage-inducible protein J {ECO:0000313|EMBL:KFI98118.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_013_043G1_scaffold_63_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14114..14578)
DNA (465bp) protein (155aa)
Probable D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000256|SAAS:SAAS00160053}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00012979};; Probable D-tyrosyl-tRNA(Tyr) deacylase 2 {ECO:0000256|SAAS:SAAS00160044}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A221_BIFAA
D-tyrosyl-tRNA(Tyr) deacylase
L2_013_043G1_scaffold_63_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14697..16064)
DNA (1368bp) protein (456aa)
Possible solute binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A220_BIFAA
ABC transporter substrate-binding protein
Possible solute binding protein of ABC transporter {ECO:0000313|EMBL:BAF39753.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_043G1_scaffold_63_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16118..17911)
DNA (1794bp) protein (598aa)
Probable alpha-1,4-glucosidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A219_BIFAA
aglA; alpha-1,4-glucosidase
Probable alpha-1,4-glucosidase {ECO:0000313|EMBL:BAF39752.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_043G1_scaffold_63_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18333..19193
DNA (861bp) protein (287aa)
LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A218_BIFAA
LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:BAF39751.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_043G1_scaffold_63_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19351..20022
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A217_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39750.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_043G1_scaffold_63_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20040..20519
DNA (480bp) protein (160aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1F8_9BIFI
D-tyrosyl-tRNA(Tyr) deacylase
L2_013_043G1_scaffold_63_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20573..21565
DNA (993bp) protein (331aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A805_BIFAD
conserved protein with hydroxyacid dehydrogenase catalytic domain
Conserved protein with hydroxyacid dehydrogenase catalytic domain {ECO:0000313|EMBL:AJE06080.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_043G1_scaffold_63_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21728..22486
DNA (759bp) protein (253aa)
Ion channel n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A804_BIFAD
Ion channel {ECO:0000313|EMBL:EDN81869.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
putative voltage-gated potassium channel protein
L2_013_043G1_scaffold_63_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22626..23624)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GN25_9BIFI
Excalibur domain containing protein {ECO:0000313|EMBL:KFI98127.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Putative Excalibur domain-containing protein
L2_013_043G1_scaffold_63_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23749..25182
DNA (1434bp) protein (478aa)
Aminopeptidase C n=3 Tax=Bifidobacterium RepID=A1A212_BIFAA
aminopeptidase C
Peptidase C1-like family {ECO:0000313|EMBL:EDN81867.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_013_043G1_scaffold_63_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25280..29098
DNA (3819bp) protein (1273aa)
Helicase {ECO:0000313|EMBL:KFI98129.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI98129.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A801_BIFAD
helicase
L2_013_043G1_scaffold_63_22
unknown

Not on your lists

29176..29298
DNA (123bp) protein (41aa)

This feature has no annotations

L2_013_043G1_scaffold_63_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29335..29982
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BTY0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN81865.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_013_043G1_scaffold_63_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30096..32423
DNA (2328bp) protein (776aa)
Cobalt import ATP-binding/permease protein cbiO {ECO:0000313|EMBL:KFI98131.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KFI98131.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Cobalt import ATP-binding/permease protein cbiO n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A209_BIFAA
cobalt import ATP-binding/permease protein cbiO
L2_013_043G1_scaffold_63_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32505..32810
DNA (306bp) protein (102aa)
Putative RNA-binding protein, YhbY family n=2 Tax=Bifidobacterium RepID=A7A7Z8_BIFAD
hypothetical protein
RNA-binding protein {ECO:0000313|EMBL:KIM01012.1}; Uncharacterized protein {ECO:0000313|EMBL:AII76433.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_043G1_scaffold_63_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32911..33678)
DNA (768bp) protein (256aa)
TENA/THI-4 family protein {ECO:0000313|EMBL:KFI98133.1}; EC=3.5.99.2 {ECO:0000313|EMBL:KFI98133.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
TENA/THI-4 family protein n=2 Tax=Bifidobacterium RepID=A7A7Z7_BIFAD
Thiaminase II
L2_013_043G1_scaffold_63_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33837..34919
DNA (1083bp) protein (361aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN81861.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN81861.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7Z6_BIFAD
putative glycosyltransferase
L2_013_043G1_scaffold_63_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35174..35941
DNA (768bp) protein (256aa)
Polyphosphate glucokinase {ECO:0000313|EMBL:KFI98135.1}; EC=2.7.1.63 {ECO:0000313|EMBL:KFI98135.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Similar to Mycobacterium tuberculosis polyphosphate glucokinase n=2 Tax=Bifidobacterium RepID=A1A205_BIFAA
polyphosphate glucokinase
L2_013_043G1_scaffold_63_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36053..37219
DNA (1167bp) protein (389aa)
Aminotransferase {ECO:0000313|EMBL:KFI98136.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KFI98136.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Aminotransferase class I/II n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1H0_9BIFI
aminotransferase
L2_013_043G1_scaffold_63_30
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37246..38055)
DNA (810bp) protein (270aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7Z3_BIFAD
ATP binding protein of ABC transporter
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI98137.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Displaying items 1-30 of 101 in total

View Taxonomy