ggKbase home page

L2_013_043G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_97_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..718)
DNA (717bp) protein (239aa)
hypothetical protein, partial n=1 Tax=Lactobacillus rhamnosus RepID=UPI0003783F1D
putative ABC transporter, ATP-binding protein ComA
ABC-type bacteriocin transporter {ECO:0000313|EMBL:EEN79767.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_97_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(967..1101)
DNA (135bp) protein (45aa)
Bacteriocin prepeptide or inducing factor for bacteriocin synthesis n=4 Tax=Lactobacillus rhamnosus RepID=S5A4J5_LACRH
Bacteriocin prepeptide or inducing factor for bacteriocin synthesis
Bacteriocin prepeptide or inducing factor for bacteriocin synthesis {ECO:0000313|EMBL:AGP75071.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1277..2590
DNA (1314bp) protein (438aa)
Putative two-component sensor kinase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7T6U5_LACRG
putative two-component sensor kinase
Putative two-component sensor kinase {ECO:0000313|EMBL:BAI42824.1}; Two component sensor transduction histidine kinase, bacteriocin {ECO:0000313|EMBL:CAR88282.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_043G1_scaffold_97_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2583..3359
DNA (777bp) protein (259aa)
Two-component response regulator, bacteriocin n=5 Tax=Lactobacillus rhamnosus RepID=C7TLZ1_LACRL
lytTr DNA-binding domain protein
Three-component quorum-sensing regulatory system, response regulator {ECO:0000313|EMBL:AGP75074.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4006..4188)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2IQS7_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC96632.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_97_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4463..4591)
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A4J8_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79760.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_97_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5207..5506)
DNA (300bp) protein (100aa)
Bacteriocin immunity protein (Homologous to piscicolin, SakXIM, ubericin, SakacinP, enterocin, mundticin) n=5 Tax=Lactobacillus rhamnosus RepID=C7TLZ3_LACRL
spiA; immunity protein
Transcriptional regulator, xre family {ECO:0000313|EMBL:AGP75077.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5685..5843)
DNA (159bp) protein (53aa)
Protein with bacteriocin-type signal sequence, alpha unit n=5 Tax=Lactobacillus rhamnosus RepID=C7TLZ4_LACRL
class IIb bacteriocin, lactobin A/cerein 7B family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75078.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6312..6497)
DNA (186bp) protein (62aa)
Protein with bacteriocin-type signal sequence, beta unit n=9 Tax=Lactobacillus rhamnosus RepID=C7TLZ5_LACRL
bacteriocin-type signal sequence domain protein
Uncharacterized protein {ECO:0000313|EMBL:EKS50395.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_97_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6557..6742)
DNA (186bp) protein (62aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TLZ6_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75080.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7128..7313)
DNA (186bp) protein (62aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TLZ7_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75081.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7363..8169)
DNA (807bp) protein (269aa)
Immunity protein PlnI, membrane-bound protease CAAX family n=5 Tax=Lactobacillus rhamnosus RepID=C7TLZ8_LACRL
CAAX amino terminal protease self-immunity family protein
Bacteriocin immunity protein, membrane-bound protease CAAX family {ECO:0000313|EMBL:AGP75082.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8490..8930)
DNA (441bp) protein (147aa)
Transcriptional regulator, Rrf2 family n=4 Tax=Lactobacillus rhamnosus RepID=C7TM00_LACRL
transcriptional regulator family protein
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EEN79750.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_97_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8985..10412)
DNA (1428bp) protein (476aa)
Transporter, major facilitator superfamily MFS_1 n=5 Tax=Lactobacillus rhamnosus RepID=C7TM01_LACRL
major facilitator superfamily protein
Transporter {ECO:0000313|EMBL:KIC96640.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_97_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10585..10917)
DNA (333bp) protein (111aa)
Conserved protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TM02_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75086.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11208..11549)
DNA (342bp) protein (114aa)
Prebacteriocin n=4 Tax=Lactobacillus rhamnosus RepID=C7TM03_LACRL
Prebacteriocin
Prebacteriocin {ECO:0000313|EMBL:AGP75087.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11720..12673)
DNA (954bp) protein (318aa)
Oxidoreductase, aldo/keto reductase family n=5 Tax=Lactobacillus rhamnosus RepID=C7TM04_LACRL
ydhF; aldo/keto reductase family oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AGP75088.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13133..13867
DNA (735bp) protein (245aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEN79868.1}; EC=1.1.1.276 {ECO:0000313|EMBL:EEN79868.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Short-chain dehydrogenase/reductase SDR n=5 Tax=Lactobacillus rhamnosus RepID=C7TM06_LACRL
ydfG; short-chain dehydrogenase/reductase SDR
L2_013_043G1_scaffold_97_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13897..15042
DNA (1146bp) protein (382aa)
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EEN79867.1}; EC=1.6.99.1 {ECO:0000313|EMBL:EEN79867.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
NADH-dependent flavin oxidoreductase n=5 Tax=Lactobacillus rhamnosus RepID=C7TM07_LACRL
flavin oxidoreductase / NADH oxidase family protein
L2_013_043G1_scaffold_97_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15067..15384)
DNA (318bp) protein (106aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TM08_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS50380.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_97_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15434..16813)
DNA (1380bp) protein (460aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Fumarate hydratase class II n=5 Tax=Lactobacillus rhamnosus RepID=C7TM09_LACRL
lyase family protein
L2_013_043G1_scaffold_97_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16989..17828)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A611_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75094.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17937..18071)
DNA (135bp) protein (45aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7THQ5_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97128.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_97_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18266..18403)
DNA (138bp) protein (46aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TM13_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75098.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18387..19994)
DNA (1608bp) protein (536aa)
Mn2+ and Fe2+ transporter of the NRAMP family protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QPX6_LACRH
mntH; NRAMP family Mn2/Fe2 transporter
Mn2 /Fe2 transporter, NRAMP family {ECO:0000313|EMBL:CAR88306.1}; Mn2+ and Fe2+ transporter protein {ECO:0000313|EMBL:BAI42849.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_043G1_scaffold_97_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20394..23111
DNA (2718bp) protein (906aa)
Cation-transporting P-type ATPase n=6 Tax=Lactobacillus rhamnosus RepID=C7TM15_LACRL
Cation transport ATPase {ECO:0000313|EMBL:AGP75100.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Cation transport ATPase
L2_013_043G1_scaffold_97_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23400..23765
DNA (366bp) protein (122aa)
Conserved protein n=10 Tax=Lactobacillus rhamnosus RepID=C7T6X1_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75101.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24081..25451)
DNA (1371bp) protein (457aa)
Transporter, major facilitator superfamily MFS_1 n=9 Tax=Lactobacillus rhamnosus RepID=C7TM17_LACRL
major facilitator superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75102.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_97_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25485..27017)
DNA (1533bp) protein (511aa)
Blue copper oxidase CueO n=4 Tax=Lactobacillus rhamnosus RepID=S5A7F2_LACRH
Multicopper oxidase {ECO:0000313|EMBL:EEN79857.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Blue copper oxidase CueO precursor
L2_013_043G1_scaffold_97_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27124..27312
DNA (189bp) protein (63aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T6X4_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS48595.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Displaying items 1-30 of 104 in total

View Taxonomy