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L2_013_043G1_scaffold_209

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_209_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(389..832)
DNA (444bp) protein (148aa)
GatB/YqeY domain protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TCV7_LACRG
Transamidase GatB domain protein
Transamidase GatB domain protein {ECO:0000313|EMBL:AGP74231.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(851..1027)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=13 Tax=Lactobacillus RepID=B5QR45_LACRH
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=219334 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei subsp. casei ATCC 393.;"
L2_013_043G1_scaffold_209_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1300..2130
DNA (831bp) protein (277aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Putative pyruvate, phosphate dikinase regulatory protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QR46_LACRH
hypothetical protein
L2_013_043G1_scaffold_209_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2127..3014)
DNA (888bp) protein (296aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Probable endonuclease 4 n=4 Tax=Lactobacillus rhamnosus RepID=C7TJJ8_LACRL
nfo; putative endonuclease 4
L2_013_043G1_scaffold_209_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3162..4082)
DNA (921bp) protein (307aa)
Conserved membrane protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TCW1_LACRG
hypothetical protein
Conserved membrane protein {ECO:0000313|EMBL:CAR87454.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42023.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_043G1_scaffold_209_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4387..4833)
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Peptide methionine sulfoxide reductase MsrB n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK0_LACRL
msrB; peptide methionine sulfoxide reductase MsrB
L2_013_043G1_scaffold_209_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(4919..6724)
DNA (1806bp) protein (602aa)
Aspartate--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK1_LACRL
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AGP74237.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
aspS; aspartyl-tRNA synthetase
L2_013_043G1_scaffold_209_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6726..8009)
DNA (1284bp) protein (428aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Histidine--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=B5QR51_LACRH
hisS; histidyl-tRNA synthetase
L2_013_043G1_scaffold_209_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8569..10077)
DNA (1509bp) protein (503aa)
ABC transporter, permease component n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK3_LACRL
hypothetical protein
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:AGP74239.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10074..10949)
DNA (876bp) protein (292aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK4_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74240.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11149..11595
DNA (447bp) protein (149aa)
Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase n=3 Tax=Lactobacillus rhamnosus RepID=C7TJK5_LACRL
diadenosine tetraphosphate (Ap4A) hydrolase-like HIT family hydrolase
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGP74241.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11683..13005
DNA (1323bp) protein (441aa)
N-acetylmuramoyl-L-alanine amidase n=11 Tax=Lactobacillus rhamnosus RepID=C7TJK6_LACRL
N-acetylmuramoyl-L-alanine amidase family protein
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGP74242.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13107..13733)
DNA (627bp) protein (209aa)
P-Ser-HPr phosphatase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK7_LACRL
P-Ser-HPr phosphatase
Phosphoglycolate phosphatase {ECO:0000313|EMBL:AGP74243.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13733..14179)
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Lactobacillus rhamnosus RepID=C7TJK8_LACRL
dtd; D-tyrosyl-tRNA(Tyr) deacylase
L2_013_043G1_scaffold_209_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14306..16531)
DNA (2226bp) protein (742aa)
RelA/SpoT family protein {ECO:0000313|EMBL:EEN80249.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EEN80249.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
RelA/SpoT family protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JXJ6_LACRH
GTP pyrophosphokinase
L2_013_043G1_scaffold_209_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17085..17408)
DNA (324bp) protein (108aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TJL0_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74247.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17446..18174)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Ribosomal RNA small subunit methyltransferase E n=5 Tax=Lactobacillus rhamnosus RepID=C7TJL1_LACRL
RNA methyltransferase, RsmE family protein
L2_013_043G1_scaffold_209_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18213..19157)
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Ribosomal protein L11 methyltransferase n=7 Tax=Lactobacillus rhamnosus RepID=S4ZU91_LACRH
prmA; 50S ribosomal protein L11 methyltransferase
L2_013_043G1_scaffold_209_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19238..19732)
DNA (495bp) protein (165aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TJL3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74250.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19729..20334)
DNA (606bp) protein (202aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Putative 3-methyladenine DNA glycosylase n=10 Tax=Lactobacillus rhamnosus RepID=B5QR63_LACRH
DNA-3-methyladenine glycosylase family protein
L2_013_043G1_scaffold_209_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20440..20688
DNA (249bp) protein (83aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TCX7_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS52699.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_209_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20757..21143)
DNA (387bp) protein (129aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TJL6_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74253.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21429..21611)
DNA (183bp) protein (61aa)
Uncharacterized protein n=13 Tax=Lactobacillus rhamnosus RepID=C8UUI7_LACRG
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS52701.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_209_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21608..22051)
DNA (444bp) protein (148aa)
Uncharacterized protein n=6 Tax=Lactobacillus rhamnosus RepID=S5A298_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS52702.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_209_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22412..23002)
DNA (591bp) protein (197aa)
NADPH-quinone reductase (Modulator of drug activity B) n=7 Tax=Lactobacillus rhamnosus RepID=C7TCY1_LACRG
putative reductase
NAD(P)H dehydrogenase {ECO:0000313|EMBL:KIC96897.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_209_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23005..23562)
DNA (558bp) protein (186aa)
Transcriptional regulator, TetR family n=4 Tax=Lactobacillus rhamnosus RepID=C7TJM0_LACRL
bacterial regulatory s, tetR family protein
Transcriptional regulator {ECO:0000313|EMBL:AGP74258.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_209_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23987..24991
DNA (1005bp) protein (335aa)
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEN80228.1}; EC=1.-.-.- {ECO:0000313|EMBL:EEN80228.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Oxidoreductase n=6 Tax=Lactobacillus rhamnosus RepID=C7TJM1_LACRL
oxidoreductase, NAD-binding Rossmann fold family protein
L2_013_043G1_scaffold_209_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25094..26710)
DNA (1617bp) protein (539aa)
Glycosyltransferase Gtf1 {ECO:0000256|HAMAP-Rule:MF_01472}; EC=2.4.1.- {ECO:0000256|HAMAP-Rule:MF_01472};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Glycosyltransferase Gtf1 n=3 Tax=Lactobacillus rhamnosus RepID=C7TJM2_LACRL
glycosyl transferases group 1 family protein
L2_013_043G1_scaffold_209_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26707..28263)
DNA (1557bp) protein (519aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEN80230.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEN80230.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Glycosyl transferase, group 1 n=4 Tax=Lactobacillus rhamnosus RepID=C7TJM3_LACRL
Poly(glycerol-phosphate) alpha-glucosyltransferase
L2_013_043G1_scaffold_209_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28315..29580)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TJM4_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74262.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 34 in total

View Taxonomy