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L2_013_043G1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_214_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(380..1222)
DNA (843bp) protein (281aa)
SAM-dependent methyltransferase n=6 Tax=Lactobacillus rhamnosus RepID=C7THT2_LACRL
rrmA; SAM-dependent methyltransferase
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:AGP73587.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1288..2235
DNA (948bp) protein (316aa)
Magnesium and cobalt transporter protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TAX7_LACRG
Magnesium and cobalt transport protein CorA
Magnesium and cobalt transport protein corA {ECO:0000313|EMBL:EKS51575.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_214_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2419..3408
DNA (990bp) protein (330aa)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
GMP reductase n=11 Tax=Lactobacillus rhamnosus RepID=C7THS9_LACRL
GMP reductase
L2_013_043G1_scaffold_214_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


3523..3792
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=64 Tax=Lactobacillus RepID=F2M947_LACCC
rpsN; 30S ribosomal protein S14p/S29e
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_214_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3842..4216)
DNA (375bp) protein (125aa)
PTS system, glucitol/sorbitol-specific IIA component n=11 Tax=Lactobacillus rhamnosus RepID=C7THS7_LACRL
PTS system transporter subunit IIA
PTS system, glucitol/sorbitol-specific IIA component {ECO:0000313|EMBL:AGP73582.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4460..5500
DNA (1041bp) protein (347aa)
3-carboxymuconate cyclase n=5 Tax=Lactobacillus rhamnosus RepID=C7THS6_LACRL
hypothetical protein
6-phosphogluconolactonase {ECO:0000313|EMBL:AGP73581.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5705..6523
DNA (819bp) protein (273aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Undecaprenyl-diphosphatase n=5 Tax=Lactobacillus rhamnosus RepID=C7THS5_LACRL
uppP; undecaprenyl-diphosphatase UppP
L2_013_043G1_scaffold_214_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6543..7181
DNA (639bp) protein (213aa)
Copper homeostasis protein CutC n=7 Tax=Lactobacillus rhamnosus RepID=C7THS4_LACRL
cutC; copper homeostasis protein CutC
CutC family protein {ECO:0000313|EMBL:EEN80893.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_214_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7398..8456
DNA (1059bp) protein (353aa)
Thiamine biosynthesis lipoprotein n=6 Tax=Lactobacillus rhamnosus RepID=C7THS3_LACRL
apbE family protein
ApbE family protein {ECO:0000313|EMBL:EEN80892.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_214_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8600..9502)
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Pseudouridine synthase n=6 Tax=Lactobacillus rhamnosus RepID=C7THS2_LACRL
RluA family pseudouridine synthase
L2_013_043G1_scaffold_214_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9502..10299)
DNA (798bp) protein (266aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=8 Tax=Lactobacillus rhamnosus RepID=B5QQI8_LACRH
ATP-NAD kinase family protein
L2_013_043G1_scaffold_214_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10301..10978)
DNA (678bp) protein (226aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:EKS49143.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EKS49143.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
GTP pyrophosphokinase n=10 Tax=Lactobacillus RepID=C7THS0_LACRL
putative GTP pyrophosphokinase
L2_013_043G1_scaffold_214_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11145..11738
DNA (594bp) protein (198aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7THR9_LACRL
hypothetical protein
Adenylate cyclase {ECO:0000313|EMBL:AGP73574.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11808..12443
DNA (636bp) protein (212aa)
Dithiol-disulfide isomerase n=7 Tax=Lactobacillus rhamnosus RepID=B5QQI5_LACRH
dithiol-disulfide isomerase
YjbH-like, GTP pyrophosphokinase domain protein {ECO:0000313|EMBL:AGP73573.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12684..13751)
DNA (1068bp) protein (356aa)
Competence protein CoiA n=5 Tax=Lactobacillus rhamnosus RepID=S5A9U7_LACRH
competence CoiA-like family protein
Competence protein CoiA {ECO:0000313|EMBL:AGP73572.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13918..15261)
DNA (1344bp) protein (448aa)
UPF0210 protein LC705_00911 n=4 Tax=Lactobacillus rhamnosus RepID=C7THR6_LACRL
Hypothetical protein
UPF0210 protein LOCK908_0926 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15416..15682)
DNA (267bp) protein (89aa)
UPF0237 protein LRH_02897 n=12 Tax=Lactobacillus rhamnosus RepID=B5QQI2_LACRH
ACT domain-containing protein
UPF0237 protein LaR308_02130 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_214_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15897..17225
DNA (1329bp) protein (443aa)
Calcineurin-like phosphoesterase family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7UX63_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73569.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17353..18561)
DNA (1209bp) protein (403aa)
Aminotransferase n=2 Tax=Lactobacillus rhamnosus RepID=C7THR3_LACRL
Putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:AGP73567.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18668..19141)
DNA (474bp) protein (158aa)
Glutathione peroxidase n=11 Tax=Lactobacillus rhamnosus RepID=C7TAV8_LACRG
bsaA; glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19466..20038
DNA (573bp) protein (191aa)
NUDIX family hydrolase n=7 Tax=Lactobacillus rhamnosus RepID=B5QQH8_LACRH
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEN80907.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
MutT/nudix family phosphohydrolase
L2_013_043G1_scaffold_214_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20035..20865
DNA (831bp) protein (277aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=4 Tax=Lactobacillus rhamnosus RepID=C7THR0_LACRL
yjeF-related protein
L2_013_043G1_scaffold_214_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20996..21211)
DNA (216bp) protein (72aa)
Uncharacterized protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TAV5_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS49154.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_214_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21297..22007)
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Pseudouridine synthase n=5 Tax=Lactobacillus rhamnosus RepID=C7THQ8_LACRL
rsuA; pseudouridine synthase A
L2_013_043G1_scaffold_214_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22012..23655)
DNA (1644bp) protein (548aa)
Polysaccharide biosynthesis family protein n=2 Tax=Lactobacillus rhamnosus RepID=G7UX55_LACRH
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids {ECO:0000313|EMBL:AGP73561.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
polysaccharide biosynthesis family protein
L2_013_043G1_scaffold_214_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(24175..26586)
DNA (2412bp) protein (804aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Leucine--tRNA ligase n=7 Tax=Lactobacillus rhamnosus RepID=B5QQH3_LACRH
Leucyl-tRNA synthetase
L2_013_043G1_scaffold_214_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27055..27678
DNA (624bp) protein (208aa)
Membrane-associated phospholipid phosphatase n=4 Tax=Lactobacillus rhamnosus RepID=C7THQ3_LACRL
membrane-associated phospholipid phosphatase
Uncharacterized protein {ECO:0000313|EMBL:AGP73558.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_214_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27743..28468)
DNA (726bp) protein (242aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7THQ2_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN80916.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_214_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28465..28716)
DNA (252bp) protein (84aa)
Permease of the major facilitator superfamily protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QQH0_LACRH
H+ antiporter-2 family protein
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EEN80915.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_214_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28729..29943)
DNA (1215bp) protein (405aa)
Permease of the major facilitator superfamily protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QQH0_LACRH
transporter protein
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EEN80915.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Displaying items 1-30 of 34 in total

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