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L2_013_043G1_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_246_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=14 Tax=Clostridium perfringens RepID=EFTU_CLOP1
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_246_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(314..955)
DNA (642bp) protein (214aa)
RNA polymerase sigma-H factor n=1 Tax=Clostridium colicanis 209318 RepID=N9XY06_9CLOT
sigH; RNA polymerase sigma-H factor
RNA polymerase sigma-H factor {ECO:0000313|EMBL:AIY84809.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1028..1540)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBM1_9CLOT
yacP-like NYN domain protein
YacP-like NYN domain protein {ECO:0000313|EMBL:AIY84968.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1555..2484)
DNA (930bp) protein (310aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium colicanis 209318 RepID=N9WCQ4_9CLOT
RNA 2'-O ribose methyltransferase substrate binding family protein
RNA 2'-O ribose methyltransferase substrate binding family protein {ECO:0000313|EMBL:AIY83157.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2520..2936)
DNA (417bp) protein (139aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium colicanis 209318 RepID=N9XYY0_9CLOT
ribonuclease III domain protein
L2_013_043G1_scaffold_246_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2987..4390)
DNA (1404bp) protein (468aa)
cysS; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Cysteine--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9XM75_9CLOT
L2_013_043G1_scaffold_246_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4406..6121)
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
proS; proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9XY09_9CLOT
L2_013_043G1_scaffold_246_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6428..7108)
DNA (681bp) protein (227aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9WD95_9CLOT
L2_013_043G1_scaffold_246_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7124..8239)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCQ8_9CLOT
PIN domain protein
PIN domain protein {ECO:0000313|EMBL:AIY82923.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8550..8948
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDD6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82829.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9020..10084)
DNA (1065bp) protein (355aa)
DNA integrity scanning protein DisA n=1 Tax=Clostridium colicanis 209318 RepID=N9XM80_9CLOT
helix-hairpin-helix motif family protein
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_043G1_scaffold_246_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10101..11468)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=1 Tax=Clostridium colicanis 209318 RepID=N9XY13_9CLOT
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_043G1_scaffold_246_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11646..12374)
DNA (729bp) protein (243aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium colicanis 209318 RepID=N9WDA0_9CLOT
L2_013_043G1_scaffold_246_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12365..13093)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCR2_9CLOT
UTRA domain protein
UTRA domain protein {ECO:0000313|EMBL:AIY83325.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13232..13408
DNA (177bp) protein (59aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84316.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13531..13764
DNA (234bp) protein (78aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium colicanis 209318 RepID=N9XM84_9CLOT
glutaredoxin family protein
Glutaredoxin {ECO:0000313|EMBL:KJU70563.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_043G1_scaffold_246_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13813..14037)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEX0_9CLOT
glutaredoxin family protein
Glutaredoxin family protein {ECO:0000313|EMBL:AIY84053.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14048..14983)
DNA (936bp) protein (312aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:AIY82847.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Thioredoxin-disulfide reductase n=1 Tax=Clostridium colicanis 209318 RepID=N9WCS0_9CLOT
L2_013_043G1_scaffold_246_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15160..17595)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYZ7_9CLOT
istB-like ATP binding family protein
IstB-like ATP binding family protein {ECO:0000313|EMBL:AIY85180.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17611..18645)
DNA (1035bp) protein (345aa)
Putative ATP:guanido phosphotransferase CLSA_c01700 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML16_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84294.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18651..19157)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0PXR7_CLONN
uvrB/uvrC motif family protein
UvrB/uvrC motif family protein {ECO:0000313|EMBL:AIY84873.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19171..19626)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDB2_9CLOT
firmicute transcriptional repressor of class III stress protein
Firmicute transcriptional repressor of class III stress protein {ECO:0000313|EMBL:AIY83338.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19789..20436
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCS5_9CLOT
beta-lactamase superfamily domain protein
Beta-lactamase superfamily domain protein {ECO:0000313|EMBL:AIY85091.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20487..20657)
DNA (171bp) protein (57aa)
Putative Ferredoxin, 4Fe-4S n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2X6_9CLOT
fer; ferredoxin
Ferredoxin {ECO:0000313|EMBL:AIY84422.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20762..20965)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XM96_9CLOT
heavy-metal-associated domain protein
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AIY83984.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20978..22774)
DNA (1797bp) protein (599aa)
Putative PSP1 domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQ89_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83795.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22841..23170)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EP76_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82445.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_043G1_scaffold_246_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23253..23933)
DNA (681bp) protein (227aa)
Thymidylate kinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UXW4_CLOBA
thymidylate kinase family protein
Thymidylate kinase {ECO:0000313|EMBL:KJU70575.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_043G1_scaffold_246_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24135..24320)
DNA (186bp) protein (62aa)
CsfB protein n=3 Tax=Bacillus cereus RepID=R8PT68_BACCE
inhibitor of sigma-G Gin family protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70576.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_043G1_scaffold_246_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24537..25040)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDC1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84037.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 33 in total

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