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L2_013_043G1_scaffold_274

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_274_1
unknown

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3..107
DNA (105bp) protein (35aa)
Site-specific recombinase, resolvase family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUT8_CLOP1
resolvase site-specific recombinase
L2_013_043G1_scaffold_274_2
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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284..1438
DNA (1155bp) protein (385aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1368424 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis CG-B52.;"
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Bacillus licheniformis CG-B52 RepID=T5HVF5_BACLI
L2_013_043G1_scaffold_274_3
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1452..3065)
DNA (1614bp) protein (538aa)
Restriction endonuclease, type II, AlwI n=3 Tax=Geobacillus RepID=C9S230_GEOSY
Strain NCTC 7096 contig_217, whole genome shotgun sequence {ECO:0000313|EMBL:KIV52896.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
restriction endonuclease, type II, AlwI
L2_013_043G1_scaffold_274_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3213..3521
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUT5_CLOP1
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CEQ11103.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_013_043G1_scaffold_274_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4285..4743)
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BS57_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15472.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_013_043G1_scaffold_274_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4914..5330
DNA (417bp) protein (139aa)
Putative transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS56_CLOPF
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:EDT15448.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MarR family transcriptional regulator
L2_013_043G1_scaffold_274_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5809..6681
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99702.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lipoprotein, putative
L2_013_043G1_scaffold_274_8
unknown

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6750..7598
DNA (849bp) protein (283aa)

This feature has no annotations

L2_013_043G1_scaffold_274_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8107..9141
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUT3_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18580.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_274_10
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9307..10089
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9D3_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD93799.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
L2_013_043G1_scaffold_274_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10143..10304)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWM5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86297.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_043G1_scaffold_274_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10415..10711
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XP23_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79849.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_274_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11231..11782
DNA (552bp) protein (184aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQV6_CLOPF
RNA 2'-phosphotransferase-like protein
L2_013_043G1_scaffold_274_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12073..12918
DNA (846bp) protein (282aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CRU3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79851.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_274_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12947..13972
DNA (1026bp) protein (342aa)
2-keto-3-deoxygluconate kinase n=6 Tax=Clostridium perfringens RepID=Q8XP20_CLOPE
2-keto-3-deoxygluconate kinase
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:BAB79852.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_274_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14036..15835
DNA (1800bp) protein (600aa)
Beta-D-glucuronidase n=1 Tax=Clostridium perfringens F262 RepID=H7CRU5_CLOPF
Beta-D-glucuronidase {ECO:0000313|EMBL:EIA18585.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
bglR; beta-D-glucuronidase
L2_013_043G1_scaffold_274_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15978..16667
DNA (690bp) protein (230aa)
Probable transcriptional regulator n=7 Tax=Clostridium perfringens RepID=Q8XP18_CLOPE
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_274_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16857..17708
DNA (852bp) protein (284aa)
D-mannonate oxidoreductase {ECO:0000313|EMBL:EIA18587.1}; EC=1.1.1.131 {ECO:0000313|EMBL:EIA18587.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
D-mannonate oxidoreductase (EC:1.1.1.131)
D-mannonate oxidoreductase n=5 Tax=Clostridium perfringens RepID=H7CRU7_CLOPF
L2_013_043G1_scaffold_274_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17723..18331
DNA (609bp) protein (203aa)
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-ox oglutarate aldolase n=3 Tax=Clostridium perfringens RepID=H7CRU8_CLOPF
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-ox oglutarate aldolase {ECO:0000313|EMBL:EIA18588.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
2-dehydro-3-deoxyphosphogluconate aldolase
L2_013_043G1_scaffold_274_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18422..19474
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=7 Tax=Clostridium perfringens RepID=H7CRU9_CLOPF
L2_013_043G1_scaffold_274_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19503..20903
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
uxaC; glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS46_CLOPF
L2_013_043G1_scaffold_274_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21021..22412
DNA (1392bp) protein (464aa)
Glucuronide permease n=3 Tax=Clostridium perfringens RepID=H7CRV1_CLOPF
Glucuronide permease {ECO:0000313|EMBL:EIA18591.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
uidB; glucuronide permease
L2_013_043G1_scaffold_274_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22476..24245
DNA (1770bp) protein (590aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Beta-N-acetylglucosaminidase/beta-glucosidase (3-beta-N-acetyl-D-glucosaminidase/beta-D-glucosidase)(Nag3) n=5 Tax=Clostridium perfringens RepID=B1BKJ5_CLOPF
beta-hexosamidase A
L2_013_043G1_scaffold_274_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24471..24548
DNA (78bp) protein (26aa)
IS1470, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STZ7_CLOPS
IS1470, transposase
IS1470, transposase {ECO:0000313|EMBL:ABG85756.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 24 items

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