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L2_013_043G1_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_312_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=DXS_CLOPS
L2_013_043G1_scaffold_312_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(100..972)
DNA (873bp) protein (291aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
Geranyltranstransferase n=4 Tax=Clostridium perfringens RepID=H7CXL4_CLOPF
Geranyltranstransferase {ECO:0000313|EMBL:EIA16669.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_312_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(962..1189)
DNA (228bp) protein (76aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Exodeoxyribonuclease 7 small subunit n=10 Tax=Clostridium perfringens RepID=EX7S_CLOP1
L2_013_043G1_scaffold_312_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1208..2410)
DNA (1203bp) protein (401aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Exodeoxyribonuclease 7 large subunit n=3 Tax=Clostridium perfringens RepID=EX7L_CLOP1
L2_013_043G1_scaffold_312_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2412..3245)
DNA (834bp) protein (278aa)
Bifunctional protein FolD n=5 Tax=Clostridium perfringens RepID=H7CXL7_CLOPF
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
L2_013_043G1_scaffold_312_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3294..3701)
DNA (408bp) protein (136aa)
N utilization substance protein B homolog n=9 Tax=Clostridium perfringens RepID=NUSB_CLOP1
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_312_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..4209)
DNA (390bp) protein (130aa)
Alkaline shock protein n=10 Tax=Clostridium perfringens RepID=H7CXL9_CLOPF
asp; alkaline shock protein
Alkaline shock protein {ECO:0000313|EMBL:EDT26326.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_312_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4294..4791)
DNA (498bp) protein (166aa)
Stage III sporulation protein AH n=10 Tax=Clostridium perfringens RepID=H7CXM0_CLOPF
stage III sporulation protein AH
Stage III sporulation protein AH {ECO:0000313|EMBL:EIA16675.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_312_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4817..5422)
DNA (606bp) protein (202aa)
Stage III sporulation protein AG n=8 Tax=Clostridium perfringens RepID=H7CXM1_CLOPF
stage III sporulation protein AG
Stage III sporulation protein AG {ECO:0000313|EMBL:EDT15087.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_312_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5437..5994)
DNA (558bp) protein (186aa)
Stage III sporulation protein AF n=2 Tax=Clostridium perfringens RepID=Q0TPC9_CLOP1
spoIIIAF; stage III sporulation protein AF
Stage III sporulation protein AF {ECO:0000313|EMBL:EDT26293.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_312_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6002..7174)
DNA (1173bp) protein (391aa)
Stage III sporulation protein AE n=4 Tax=Clostridium perfringens RepID=H7CXM3_CLOPF
stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:EIA16678.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_312_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7185..7571)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJD0_CLOPE
spoIIIAD; stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:BAB81536.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_312_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7659..7856)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=10 Tax=Clostridium perfringens RepID=H7CXM5_CLOPF
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:EDS80437.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_043G1_scaffold_312_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7932..8447)
DNA (516bp) protein (172aa)
Stage III sporulation protein AB n=7 Tax=Clostridium perfringens RepID=Q0SRZ2_CLOPS
stage III sporulation protein SpoAB
Stage III sporulation protein AB {ECO:0000313|EMBL:EDT26298.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_312_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8594..9478)
DNA (885bp) protein (295aa)
Stage III sporulation protein AA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJC7_CLOPE
spoIIIAA; stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:BAB81539.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_312_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9676..10038)
DNA (363bp) protein (121aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXM8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16683.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_312_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10152..10709)
DNA (558bp) protein (186aa)
Elongation factor P n=10 Tax=Clostridium perfringens RepID=EFP_CLOP1
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_043G1_scaffold_312_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10880..11227)
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJC4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81542.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_312_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11215..11664)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXN1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16686.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_312_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11624..12241)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSH3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26303.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_312_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12210..12620)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXN3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16688.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_043G1_scaffold_312_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12607..12873)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8X0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23280.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_013_043G1_scaffold_312_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13038..13550)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXN5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16690.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_013_043G1_scaffold_312_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13540..13998)
DNA (459bp) protein (153aa)
Putative type IV pilin n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RKY5_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EIA16691.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
prepilin peptidase-dependent
L2_013_043G1_scaffold_312_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13991..15010)
DNA (1020bp) protein (340aa)
Putative pilus biogenesis protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI69_CLOPF
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT26290.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
pilC; fimbrial assembly protein
L2_013_043G1_scaffold_312_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14997..16385)
DNA (1389bp) protein (463aa)
Probable type IV pilus assembly protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJB6_CLOPE
tapB; type IV pilus assembly protein
Probable type IV pilus assembly protein {ECO:0000313|EMBL:BAB81550.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_312_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16560..17675)
DNA (1116bp) protein (372aa)
IS605 OrfB family transposase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNP8_CLOPF
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EDS79015.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
putative IS transposase (OrfB)
L2_013_043G1_scaffold_312_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17653..18279)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNP7_CLOPF
Transposon, resolvase {ECO:0000313|EMBL:EES90966.1}; TaxID=592027 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 1873.;"
transposon, resolvase
L2_013_043G1_scaffold_312_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18462..19493)
DNA (1032bp) protein (344aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3U1_CLOPF
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EDT15140.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_312_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19510..20328)
DNA (819bp) protein (273aa)
Diaminopimelate epimerase {ECO:0000255|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000255|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00197};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Diaminopimelate epimerase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPF_CLOPE
dapF; diaminopimelate epimerase
Displaying items 1-30 of 31 in total

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