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L2_013_043G1_scaffold_325

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_325_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..253
DNA (252bp) protein (84aa)
GIY-YIG domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIG1_CLOPF
GIY-YIG domain protein {ECO:0000313|EMBL:EDT26260.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
GIY-YIG domain-containing protein
L2_013_043G1_scaffold_325_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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231..851
DNA (621bp) protein (207aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIG0_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT26262.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_013_043G1_scaffold_325_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1059..1856
DNA (798bp) protein (266aa)
Formate/nitrite transporter n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPR7_CLOPF
Formate/nitrite transporter {ECO:0000313|EMBL:EDT70304.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
nirC; nitrite transporter
L2_013_043G1_scaffold_325_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2074..2766
DNA (693bp) protein (231aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridium perfringens RepID=B1BN65_CLOPF
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDS78725.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Crp/Fnr family transcriptional regulator
L2_013_043G1_scaffold_325_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3005..4021
DNA (1017bp) protein (339aa)
Anaerobic sulfite reductase subunit A n=3 Tax=Clostridium perfringens RepID=H7CWH2_CLOPF
sulfite reductase, iron-sulfur subunit
Anaerobic sulfite reductase subunit A {ECO:0000313|EMBL:EIA16957.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_325_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4014..4805
DNA (792bp) protein (264aa)
Anaerobic sulfite reductase, subunit B n=6 Tax=Clostridium perfringens RepID=Q0ST12_CLOPS
asrB; anaerobic sulfite reductase subunit B
Anaerobic sulfite reductase, subunit B {ECO:0000313|EMBL:ABG87725.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_043G1_scaffold_325_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4819..5799
DNA (981bp) protein (327aa)
Anaerobic sulfite reductase, subunit C n=9 Tax=Clostridium perfringens RepID=Q0TQG1_CLOP1
arsC; anaerobic sulfite reductase subunit C
Anaerobic sulfite reductase, subunit C {ECO:0000313|EMBL:EDT26263.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_325_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6225..7427
DNA (1203bp) protein (401aa)
Glutamyl-tRNA reductase {ECO:0000255|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000255|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000255|HAMAP-Rule:MF_00087};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glutamyl-tRNA reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=HEM1_CLOPE
hemA; glutamyl-tRNA reductase
L2_013_043G1_scaffold_325_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7391..8053
DNA (663bp) protein (221aa)
Siroheme synthase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIF3_CLOPF
Siroheme synthase {ECO:0000313|EMBL:EDT26277.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
precorrin-2 dehydrogenase
L2_013_043G1_scaffold_325_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8397..9272
DNA (876bp) protein (292aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Porphobilinogen deaminase n=4 Tax=Clostridium perfringens RepID=HEM3_CLOP1
L2_013_043G1_scaffold_325_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9281..10759
DNA (1479bp) protein (493aa)
Uroporphyrinogen-III methyltransferase/synthase {ECO:0000313|EMBL:EDS78730.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EDS78730.1};; EC=4.2.1.75 {ECO:0000313|EMBL:EDS78730.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hemD; uroporphyrinogen-III methyltransferase/synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III methyltransferase/synthase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BN72_CLOPF
L2_013_043G1_scaffold_325_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10816..11781
DNA (966bp) protein (322aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Delta-aminolevulinic acid dehydratase n=10 Tax=Clostridium perfringens RepID=H7CWG5_CLOPF
L2_013_043G1_scaffold_325_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11845..13122
DNA (1278bp) protein (426aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=4 Tax=Clostridium perfringens RepID=B1R6T0_CLOPF
L2_013_043G1_scaffold_325_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13323..14948
DNA (1626bp) protein (542aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIE8_CLOPF
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDT26251.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
FAD flavoprotein oxidase
L2_013_043G1_scaffold_325_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15250..16680)
DNA (1431bp) protein (477aa)
cls; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Cardiolipin synthase n=5 Tax=Clostridium perfringens RepID=CLS_CLOP1
L2_013_043G1_scaffold_325_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16761..18302)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16946.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_325_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18618..19547
DNA (930bp) protein (310aa)
ClpB protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIE5_CLOPF
clpB; clpB protein
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 17 items

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