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L2_013_043G1_scaffold_336

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_336_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
Anti-oxidant AhpCTSA family protein n=6 Tax=Clostridium perfringens RepID=H7CS62_CLOPF
AhpC/TSA family protein
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDS79286.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_013_043G1_scaffold_336_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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774..1520
DNA (747bp) protein (249aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Peptidyl-prolyl cis-trans isomerase family protein n=9 Tax=Clostridium perfringens RepID=H7CS63_CLOPF
peptidyl-prolyl cis-trans isomerase
L2_013_043G1_scaffold_336_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1984..2796
DNA (813bp) protein (271aa)
ABC-2 type transporter, permease protein n=3 Tax=Clostridium perfringens RepID=B1BXQ2_CLOPF
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_336_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2814..3986
DNA (1173bp) protein (391aa)
ABC transporter, ATP-binding protein n=9 Tax=Clostridium perfringens RepID=H7CS65_CLOPF
ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB79976.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_336_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4000..5283
DNA (1284bp) protein (428aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13525.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13525.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Teichuronic acid biosynthesis glycosyl transferase n=10 Tax=Clostridium perfringens RepID=H7CS66_CLOPF
teichuronic acid biosynthesis glycosyl transferase
L2_013_043G1_scaffold_336_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5302..6537
DNA (1236bp) protein (412aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13528.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13528.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycosyl transferase, group 1 family protein n=8 Tax=Clostridium perfringens RepID=H7CS67_CLOPF
L2_013_043G1_scaffold_336_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6551..7732
DNA (1182bp) protein (394aa)
Teichoic acid ABC transporter ATP-binding protein n=3 Tax=Clostridium perfringens RepID=H7CS68_CLOPF
Teichoic acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIA18479.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
teichoic acid ABC transporter ATP-binding protein
L2_013_043G1_scaffold_336_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7847..9280
DNA (1434bp) protein (478aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT25607.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT25607.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKA3_CLOPF
L2_013_043G1_scaffold_336_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9416..10069)
DNA (654bp) protein (218aa)
Haloacid dehalogenase, IA family protein n=2 Tax=Clostridium perfringens RepID=Q0SWA9_CLOPS
haloacid dehalogenase, IA family protein
Haloacid dehalogenase, IA family protein {ECO:0000313|EMBL:ABG85510.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_043G1_scaffold_336_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10151..11500)
DNA (1350bp) protein (450aa)
[Fe] hydrogenase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTL8_CLOPF
[Fe] hydrogenase
[Fe] hydrogenase {ECO:0000313|EMBL:EIA18482.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_336_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11635..11781
DNA (147bp) protein (49aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS72_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25608.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_336_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12199..12489
DNA (291bp) protein (97aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS73_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18484.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_336_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12674..13972
DNA (1299bp) protein (433aa)
SagA protein n=4 Tax=Clostridium perfringens RepID=H7CS74_CLOPF
SagA protein {ECO:0000313|EMBL:EIA18485.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
SagA protein
L2_013_043G1_scaffold_336_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14146..14916
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK98_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25610.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_013_043G1_scaffold_336_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14919..15761
DNA (843bp) protein (281aa)
tetrapyrrole methylase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Clostridium perfringens RepID=H7CS77_CLOPF
L2_013_043G1_scaffold_336_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16077..16316)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=6 Tax=Clostridium perfringens RepID=H7CS78_CLOPF
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EIA18400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_336_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17008..17607
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XNQ0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_336_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17644..18519)
DNA (876bp) protein (292aa)
Putative aldose 1-epimerase n=2 Tax=Clostridium perfringens RepID=B1BK11_CLOPF
Putative aldose 1-epimerase {ECO:0000313|EMBL:EDS79912.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
aldose 1-epimerase
L2_013_043G1_scaffold_336_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18630..18857)
DNA (228bp) protein (76aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUF0_CLOP1
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EDT13892.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying 19 items

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