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L2_013_043G1_scaffold_354

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_354_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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239..1663
DNA (1425bp) protein (475aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R8_ATOPD
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EWC93878.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
EmrB/QacA subfamily drug resistance transporter
L2_013_043G1_scaffold_354_2
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1931..2131)
DNA (201bp) protein (67aa)
Putative fluoride ion transporter CrcB n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKZ9_9ACTN
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
CrcB protein
L2_013_043G1_scaffold_354_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2141..3961)
DNA (1821bp) protein (607aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R5_ATOPD
ABC transporter transmembrane region {ECO:0000313|EMBL:EWC94024.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L2_013_043G1_scaffold_354_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3954..5756)
DNA (1803bp) protein (601aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R4_ATOPD
ABC transporter transmembrane region {ECO:0000313|EMBL:EWC93952.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L2_013_043G1_scaffold_354_5
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5802..7628)
DNA (1827bp) protein (609aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EWC94019.1}; EC=6.1.1.- {ECO:0000313|EMBL:EWC94019.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Aspartate--tRNA ligase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9R3_ATOPD
aspartyl-tRNA synthetase
L2_013_043G1_scaffold_354_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7875..8525
DNA (651bp) protein (217aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q7_ATOPD
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:EWC93885.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
HAD-superfamily hydrolase
L2_013_043G1_scaffold_354_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8689..8997
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q5_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC93955.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_043G1_scaffold_354_8
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9161..10756)
DNA (1596bp) protein (532aa)
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:EWC94017.1}; EC=1.12.-.- {ECO:0000313|EMBL:EWC94017.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ferredoxin hydrogenase (EC:1.12.7.2)
Ferredoxin hydrogenase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q4_ATOPD
L2_013_043G1_scaffold_354_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10841..11581)
DNA (741bp) protein (247aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EWC93854.1}; EC=5.4.99.- {ECO:0000313|EMBL:EWC93854.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Pseudouridine synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q3_ATOPD
pseudouridine synthase
L2_013_043G1_scaffold_354_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11583..12524)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q2_ATOPD
LysR substrate-binding domain protein {ECO:0000313|EMBL:EWC93986.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
LysR family transcriptional regulator
L2_013_043G1_scaffold_354_11
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12642..14075
DNA (1434bp) protein (478aa)
Na+/H+ antiporter NhaC n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q1_ATOPD
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EWC93871.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Na+/H+ antiporter NhaC
L2_013_043G1_scaffold_354_12
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14142..14795)
DNA (654bp) protein (218aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9Q0_ATOPD
Putative bacteriocin ABC transporter {ECO:0000313|EMBL:EWC94023.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein
L2_013_043G1_scaffold_354_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14798..16963)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9P9_ATOPD
Putative membrane protein {ECO:0000313|EMBL:EWC94166.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L2_013_043G1_scaffold_354_14
unknown

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comp(16968..17123)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 14 items

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