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L2_013_043G1_scaffold_371

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_371_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..239
DNA (237bp) protein (79aa)
Sugar fermentation stimulation protein homolog n=4 Tax=Clostridium perfringens RepID=SFSA_CLOP1
sfsA; sugar fermentation stimulation protein A
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_371_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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653..1192
DNA (540bp) protein (180aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium perfringens RepID=B1BEX9_CLOPF
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS81636.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
NUDIX family hydrolase
L2_013_043G1_scaffold_371_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1603..2898
DNA (1296bp) protein (432aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Clostridium perfringens RepID=B1RJB5_CLOPF
L2_013_043G1_scaffold_371_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3355..3573
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMU2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_371_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3576..4106
DNA (531bp) protein (177aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF
L2_013_043G1_scaffold_371_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4131..6272
DNA (2142bp) protein (714aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium perfringens RepID=H7CT37_CLOPF
ftsH; ATP-dependent metalloprotease FtsH
L2_013_043G1_scaffold_371_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6493..8613
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Putative helicase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJB9_CLOPF
helicase
L2_013_043G1_scaffold_371_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9069..9905
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RST2_CLOPF
amino acid ABC transporter
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80306.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_371_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9936..10610
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
His/Glu/Gln/Arg/opine ABC transporter permease
L2_013_043G1_scaffold_371_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10604..11326
DNA (723bp) protein (241aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=Q0TTK4_CLOP1
amino acid ABC transporter
Probable amino acid ABC transporter {ECO:0000313|EMBL:BAB80308.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_371_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11544..13352
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1
sulfatase
Sulfatase family protein {ECO:0000313|EMBL:EDT14521.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_371_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13604..15448
DNA (1845bp) protein (615aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3V8_CLOPF
Sulfatase domain protein {ECO:0000313|EMBL:EDT71511.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_013_043G1_scaffold_371_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15551..16618)
DNA (1068bp) protein (356aa)
Cation efflux family protein n=4 Tax=Clostridium perfringens RepID=H7CT44_CLOPF
Cation efflux family protein {ECO:0000313|EMBL:EDT71490.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
cation efflux family protein
Displaying 13 items

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