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L2_013_043G1_scaffold_394

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_394_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1004)
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=2 Tax=Clostridium perfringens RepID=H7CT58_CLOPF
L2_013_043G1_scaffold_394_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1154..2038)
DNA (885bp) protein (295aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ8_CLOPF
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_394_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2052..2621)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT27840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT27840.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Clostridium perfringens RepID=H7CT56_CLOPF
L2_013_043G1_scaffold_394_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2634..3545)
DNA (912bp) protein (304aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CT55_CLOPF
L2_013_043G1_scaffold_394_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3596..4507)
DNA (912bp) protein (304aa)
Glycosyl transferase, group 2 family protein n=3 Tax=Clostridium perfringens RepID=H7CT54_CLOPF
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EIA17856.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycosyl transferase family protein
L2_013_043G1_scaffold_394_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4508..5170)
DNA (663bp) protein (221aa)
Sugar transferase family protein n=6 Tax=Clostridium perfringens RepID=H7CT53_CLOPF
sugar transferase
Bacterial sugar transferase family protein {ECO:0000313|EMBL:EDT25947.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_394_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5207..6007)
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF
HAD family hydrolase
L2_013_043G1_scaffold_394_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6383..6988
DNA (606bp) protein (202aa)
Conserved domain protein n=6 Tax=Clostridium perfringens RepID=Q0TTJ4_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT25936.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_394_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7201..8796
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_394_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9058..12387
DNA (3330bp) protein (1110aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUT9_CLOPF
Membrane protein, MmpL family {ECO:0000313|EMBL:EDT14525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MmpL family membrane protein
L2_013_043G1_scaffold_394_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12604..13443)
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJC8_CLOPF
HAD hydrolase, IIB family {ECO:0000313|EMBL:EDT25940.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
HAD family hydrolase
L2_013_043G1_scaffold_394_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13832..14026
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVE5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86116.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_043G1_scaffold_394_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14119..15414)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
M18 family aminopeptidase n=3 Tax=Clostridium perfringens RepID=B1RST8_CLOPF
aminopeptidase 2
Displaying 13 items

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