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L2_013_043G1_scaffold_412

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_412_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11..283
DNA (273bp) protein (91aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CXV8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16245.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_412_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(301..822)
DNA (522bp) protein (174aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CXV7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26563.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_043G1_scaffold_412_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(823..1593)
DNA (771bp) protein (257aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXV6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16309.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_412_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1773..3005
DNA (1233bp) protein (411aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=3 Tax=Clostridium perfringens RepID=H7CXV5_CLOPF
L2_013_043G1_scaffold_412_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3255..4217
DNA (963bp) protein (321aa)
Dipeptidase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL68_CLOPF
Dipeptidase family protein {ECO:0000313|EMBL:EIA16468.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
dipeptidase
L2_013_043G1_scaffold_412_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4323..5069
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDT72781.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDT72781.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL67_CLOPF
L2_013_043G1_scaffold_412_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5377..6900)
DNA (1524bp) protein (508aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensor histidine kinase n=2 Tax=Clostridium perfringens RepID=B1RL66_CLOPF
sensor histidine kinase
L2_013_043G1_scaffold_412_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6900..7571)
DNA (672bp) protein (224aa)
Two-component response regulator n=11 Tax=Clostridium perfringens RepID=Q8XJ36_CLOPE
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EIA16465.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_412_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7666..8910
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSQ5_CLOPF
M16 family peptidase
Probable zinc protease {ECO:0000313|EMBL:BAB81630.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_412_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8916..9554
DNA (639bp) protein (213aa)
Regulatory protein RecX n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=RECX_CLOP1
recX; recombination regulator RecX
Regulatory protein RecX {ECO:0000255|HAMAP-Rule:MF_01114}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
L2_013_043G1_scaffold_412_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9560..10735
DNA (1176bp) protein (392aa)
Transglutaminase domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQ05_CLOPF
Transglutaminase domain protein {ECO:0000313|EMBL:EDT16307.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
transglutaminase domain-containing protein
L2_013_043G1_scaffold_412_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10941..11291)
DNA (351bp) protein (117aa)
TPR repeat-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXU7_CLOPF
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT16224.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_412_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11941..14583
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=H7CXU6_CLOPF
Displaying 13 items

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