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L2_013_043G1_scaffold_472

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_472_1
unknown

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comp(3..548)
DNA (546bp) protein (182aa)

This feature has no annotations

L2_013_043G1_scaffold_472_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1069..2244
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
S-adenosylmethionine synthase n=9 Tax=Clostridium perfringens RepID=METK_CLOP1
L2_013_043G1_scaffold_472_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2381..3517)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF
L2_013_043G1_scaffold_472_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3654..5888
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Exodeoxyribonuclease V alpha subunit n=3 Tax=Clostridium perfringens RepID=Q8XIE6_CLOPE
recD; RecD/TraA family helicase
L2_013_043G1_scaffold_472_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5906..6868
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIE7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81880.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_043G1_scaffold_472_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6844..7503
DNA (660bp) protein (220aa)
ComF protein, homolog n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG0_CLOPF
ComF protein, homolog {ECO:0000313|EMBL:EDT27017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
competence protein FC
L2_013_043G1_scaffold_472_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7956..8495
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_043G1_scaffold_472_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8732..11254
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
secA; preprotein translocase subunit SecA
L2_013_043G1_scaffold_472_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11512..11634
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_043G1_scaffold_472_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11636..12607
DNA (972bp) protein (324aa)
peptide chain release factor 2 n=1 Tax=Clostridium perfringens RepID=UPI0000DB5E22
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_043G1_scaffold_472_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12856..13134)
DNA (279bp) protein (93aa)
Peptidase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLV7_CLOPF
Peptidase family protein {ECO:0000313|EMBL:EIA16371.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
peptidase
Displaying 11 items

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