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L2_013_043G1_scaffold_340_4

Organism: L2_013_043G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 4254..8015

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1253.0
  • Bit_score: 2499
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=6 Tax=Lactobacillus RepID=C2JYG5_LACRH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1253.0
  • Bit_score: 2499
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1200.0
  • Bit_score: 2390
  • Evalue 0.0

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Taxonomy

Lactobacillus rhamnosus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3762
ATGAAAAAAGCAAAAACAGCAGGCTGGTTGAAGGTCGATCTGTTTTTGGTTTTTTTTTGCTCAAAATGTCTGCGGGATGGTCAATGTCATGTAAATTTAACAATATTTACATTATTTTTACAATCATCAAGCCGGAAAATCTTACAAGGGGTGAATAATTTGGCAGGACACTTAGTGAATTATGGTAAGCACCGGACACGCCGGTCTTATGCCCGGATCAAGGAAGTTTTGGATCTTCCTAATCTGATCGAGATCCAAACGAATTCTTACCAATGGTTCCTCGATGAAGGTCTTAAAGAAATGTTCGACGATATTATGCCGATCGATGACTTTCAGGGGAAACTGTCACTGGAATTTGTCGGCTATCAACTGCTGGAACCGAAATATACTGTCGAGGAAGCACGCCAACACGATGCGAACTACTCCGCACCATTGCATGTAACCTTACGTTTGACGAATCATGAAACTGGCGAAATCAAGAGCCAGGACGTCTTTTTTGGTGATTTTCCATTAATGACGAAACAAGGAACGTTCATTATCAACGGGGCAGAACGGGTTATCGTTTCCCAGCTGGTTCGTTCTCCTGGCGTTTACTTCCATAGTGAAACAGATAAGAATTCACGGGTGACGTATGGCACGACTGTCATTCCTAACCGTGGGGCATGGTTGGAATATGAAACCGATGCGAAGGACATTGCGTATGTCCGGATTGATCGCACGCGGAAGATTCCTCTGACCGAATTGGTTCGCGCATTGGGCTTTGGCTCCGATCAAGACATTATTAATATGTTCGGGGATAACGATTCGTTGATGCTCACGCTTGAAAAAGATGTGCATAAGAATACGGATGATTCCCGTACTGATGAAGCCTTGAAGGATATTTATGAACGTCTACGTCCAGGCGAACCTAAGACTGCTGATTCATCGCGGTCACTTTTGTATGCCCGCTTCTTTGACCCGAAGCGTTATGACTTAGCCTCTGTTGGGCGTTACAAGGTGAACAAGAAGCTGAGCCTGAAGACCCGGCTATTGAATCAGGTTTTAGCGGAAACACTGGCTGATCCGGATACAGGTGAAGTCCTTGCCCAAAAAGGGACCAAAGTGGATCGCCAAGTGATGGATAAGCTGGCACCGTACTTGGATCGGGATGATTTCAAGACGGTCACTTATCAACCTTCTGATCAAGGTGTGATGACCGATCCGATTGAGCTGCAGAGTATTAAAGTTTACTCACAGGTGACCCCGGATAAAGAAATTAATTTGATTGGCAATGGGCATATTGGCAAGAAAGTTAAGCATATTTTGCCAGCTGACGTTTTGGCATCGATGAACTACTTCCTGAACTTGCAGGAGGGCCTTGGCACGGTTGATGATATTGACCACTTGGGTAATCGTCGTATTCGTTCCGTTGGTGAATTATTGCAAAATCAGTTCCGGATCGGGCTTTCGCGGATGGAACGGGTTGTTCGCGAACGGATGTCGATTCAGGACACCGCAACCGTTACACCGCAGCAATTGATCAATATTCGGCCAGTTGTCGCTTCAATTAAGGAATTCTTTGGTAGTTCCCAGTTGTCACAGTTCATGGATCAGACCAATCCGTTGGGCGAATTAACCCATAAACGGCGTCTGTCTGCCCTTGGACCTGGTGGCTTGACTCGTGATCGTGCGGGTTATGAAGTTCGAGATGTTCATTACACCCATTATGGCCGGATGTGTCCGATTGAAACCCCTGAAGGCCCGAACATCGGGCTGATTAACAGCTTGGCTTCATACGCGGTCGTTAACCCATACGGCTTCATTGAAACGCCATATCGACGGGTTTCATGGGATACGCATAAGGTTACCGACAAGATCGATTACCTGACAGCTGACGAAGAAGATAACTACATTGTTGCGCAGGCAAACTCGCCACTAAACGATGATGGGTCCTTCGTTGATGACACGGTTTTGGCCCGGCATAAAGATAACAATATTGAAATTTCACCAGACAAAGTCGACTACATGGACGTTTCGCCTAAGCAGGTTGTCGCAGTCGCAACCGCCTGCATTCCATTCTTGGAAAACGACGACTCTAATCGTGCGTTGATGGGTGCTAACATGCAGCGTCAGGCGGTACCTTTGATCAACCCGCATGCCCCGCTTGTCGGGACCGGGATGGAGTACAAAGCCGCCCATGACTCTGGAACCGCGGTTTTGGCTAACAATGCCGGTACGGTTGAATATGTCGATGCTAAGCAAATCCGGGTACGTCGTGAAGACGGTGCCTTGGACACTTACAAATTGATGAAATTCAAGCGTAGTAACGCCGGTAAGAACTACAACCAACGTCCGATTGTTACGATCGGTGACCATGTCGATGTCGATGAAATCATTGCTGATGGACCAGCCATGCAAAATGGTGAATTGGCATTGGGGCAAAACCCAATCATCGCCTTCATGACTTGGAACATGTACAACTACGAAGATGCGATTGTGCTGTCTGAACGGTTGGTTAAAGATGATGTTTACACGTCAATCCATATTGAAGAATATGAATCAGAAGCACGTGACACCAAACTTGGACCTGAAGAAGTCACGCGTGAGATTCCAAACGTTGGTGAAGAAGCCCTCAAGGATCTCGATGAATTCGGGGTTGTCCGTGTCGGTGCCGAAGTTCGGGATGGCGACATTCTGGTTGGTAAAGTAACGCCTAAGGGAGTCACGGAATTATCTGCCGAAGAACGCCTGCTGCACGCAATTTTTGGTGAAAAAGCACGTGAAGTTCGCGACACATCGCTGCGGGTTCCGCATGGTGGCGGCGGTATTATTCAGGACGTCAAAATCTTCACCCGTGAAGCTGGAGATGAATTATCTCCTGGCGTCAACATGATGGTACGGGTTTACATCACGCAGAAGCGGAAAATTCAAGTTGGTGACAAGATGGCCGGTCGTCATGGGAACAAAGGGACGGTTTCCGTCGTTGTGCCTGAAGAAGACATGCCATACTTGCCAGATGGTACCCCAGTCGATATTTGCTTGTCGCCAATGGGTGTGCCAAGTCGTATGAACATCGGGCAGGTGCTGGAATTGCATCTGGGCATGGCTGCTCGTAACTTAGGCATTCATGTTGCAACGCCAGTCTTTGACGGTGCCAACGATAAAGACTTGTGGGCAACCGTTAAAGAAGCCGGCATGCCATCTGATGGGAAGTCAGTCTTATATGATGGCCGTACCGGAGAACCATTTGAAAACCGGGTATCTGTCGGTGTCATGTATTACATGAAGCTATCTCACATGGTTGATGATAAGATCCATGCGCGTTCAATTGGACCTTACAGCTTAGTTACCCAGCAGCCTCTTGGTGGTAAAGCTCAGTTTGGTGGCCAGCGGTTTGGTGAAATGGAAGTCTGGGCCCTTGAAGCTTATGGTGCAGCGTATACCTTACAGGAAATCTTGACTTATAAGTCCGATGACGTTGTTGGCCGAGTTAAGACCTACGAAGCCATCGTTAAAGGCGATCCAATTCCAAAGCCTGGCGTACCGGAATCATTCCGTGTGCTTGTCAAGGAATTGCAAGCGCTGGGACTTGATATGAAGGTTCTAGGTGCTGATAAGCAGGAAATCGAATTGCGCGACATGGACGATGACGAAGACGATGTTGTTTCTGTCGATGCATTAGCGAAGTTCGCAGCTCAGCAAGAAGAAAAGAAGGCACACGAAGCCGCAACCCAAGCAAGTGACGGTCAGTCTGCCGACAATAGTACCGACGATAAGAAATAG
PROTEIN sequence
Length: 1254
MKKAKTAGWLKVDLFLVFFCSKCLRDGQCHVNLTIFTLFLQSSSRKILQGVNNLAGHLVNYGKHRTRRSYARIKEVLDLPNLIEIQTNSYQWFLDEGLKEMFDDIMPIDDFQGKLSLEFVGYQLLEPKYTVEEARQHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMTKQGTFIINGAERVIVSQLVRSPGVYFHSETDKNSRVTYGTTVIPNRGAWLEYETDAKDIAYVRIDRTRKIPLTELVRALGFGSDQDIINMFGDNDSLMLTLEKDVHKNTDDSRTDEALKDIYERLRPGEPKTADSSRSLLYARFFDPKRYDLASVGRYKVNKKLSLKTRLLNQVLAETLADPDTGEVLAQKGTKVDRQVMDKLAPYLDRDDFKTVTYQPSDQGVMTDPIELQSIKVYSQVTPDKEINLIGNGHIGKKVKHILPADVLASMNYFLNLQEGLGTVDDIDHLGNRRIRSVGELLQNQFRIGLSRMERVVRERMSIQDTATVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLASYAVVNPYGFIETPYRRVSWDTHKVTDKIDYLTADEEDNYIVAQANSPLNDDGSFVDDTVLARHKDNNIEISPDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPHAPLVGTGMEYKAAHDSGTAVLANNAGTVEYVDAKQIRVRREDGALDTYKLMKFKRSNAGKNYNQRPIVTIGDHVDVDEIIADGPAMQNGELALGQNPIIAFMTWNMYNYEDAIVLSERLVKDDVYTSIHIEEYESEARDTKLGPEEVTREIPNVGEEALKDLDEFGVVRVGAEVRDGDILVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIQDVKIFTREAGDELSPGVNMMVRVYITQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYLPDGTPVDICLSPMGVPSRMNIGQVLELHLGMAARNLGIHVATPVFDGANDKDLWATVKEAGMPSDGKSVLYDGRTGEPFENRVSVGVMYYMKLSHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGDPIPKPGVPESFRVLVKELQALGLDMKVLGADKQEIELRDMDDDEDDVVSVDALAKFAAQQEEKKAHEAATQASDGQSADNSTDDKK*