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L2_013_043G1_scaffold_340

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_043G1_scaffold_340_1
unknown

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comp(155..559)
DNA (405bp) protein (135aa)
seg 75..86 id=1241048 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
L2_013_043G1_scaffold_340_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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957..1424
DNA (468bp) protein (156aa)
Transcriptional repressor of class III stress genes n=11 Tax=Lactobacillus rhamnosus RepID=B5QPQ3_LACRH
ctsR; transcriptional regulator CtsR family
Transcriptional regulator CtsR {ECO:0000313|EMBL:AGP75193.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_043G1_scaffold_340_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1464..3971
DNA (2508bp) protein (836aa)
ATP-dependent Clp protease ATP-binding subunit n=10 Tax=Lactobacillus rhamnosus RepID=C7TMA8_LACRL
AAA ATPase
ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:EKS50183.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_043G1_scaffold_340_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4254..8015
DNA (3762bp) protein (1254aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA-directed RNA polymerase subunit beta n=6 Tax=Lactobacillus RepID=C2JYG5_LACRH
rpoB; DNA-directed RNA polymerase subunit beta
L2_013_043G1_scaffold_340_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8028..11690
DNA (3663bp) protein (1221aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
DNA-directed RNA polymerase subunit beta' n=4 Tax=Lactobacillus rhamnosus RepID=C7TMA5_LACRL
DNA-directed RNA polymerase subunit beta'
L2_013_043G1_scaffold_340_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(11868..12371)
DNA (504bp) protein (168aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TMA4_LACRL
hypothetical protein
Peptidase {ECO:0000313|EMBL:KIC98235.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_043G1_scaffold_340_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12752..13291
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5AEH1_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79875.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_043G1_scaffold_340_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13261..18597
DNA (5337bp) protein (1779aa)
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EEN79876.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EEN79876.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A4R5_LACRH
Hypothetical protein
Displaying 8 items

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