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L2_013_122G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_17_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..361
DNA (360bp) protein (120aa)
Putative transposase DNA-binding domain protein n=16 Tax=Clostridium difficile RepID=T2VDF3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87714.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
tlpB9; Transposase-like protein B
L2_013_122G1_scaffold_17_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

495..764
DNA (270bp) protein (90aa)
Uncharacterized protein n=21 Tax=Clostridium difficile RepID=T2UH70_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87713.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_013_122G1_scaffold_17_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

791..1123
DNA (333bp) protein (111aa)
Uncharacterized protein n=138 Tax=Clostridium difficile RepID=Q185H3_CLOD6
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH27799.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ98913.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_122G1_scaffold_17_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1397..1549
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6BZ38_CLODI
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CAJ69184.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_013_122G1_scaffold_17_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1743..2297
DNA (555bp) protein (185aa)
Short C-terminal domain protein n=8 Tax=Clostridium difficile RepID=T2VGN8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG76128.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
conserved hypothetical protein
L2_013_122G1_scaffold_17_6
unknown

Not on your lists

3344..3532
DNA (189bp) protein (63aa)

This feature has no annotations

L2_013_122G1_scaffold_17_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4115..4357
DNA (243bp) protein (81aa)
Uncharacterized protein n=103 Tax=Clostridium difficile RepID=T4PLP1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22616.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L2_013_122G1_scaffold_17_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4478..4843
DNA (366bp) protein (122aa)
BRO family, N-terminal domain protein n=31 Tax=Clostridium difficile RepID=T2TFE1_CLODI
BRO family, N-terminal domain protein {ECO:0000313|EMBL:EQG75209.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative phage-related regulatory protein
L2_013_122G1_scaffold_17_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4840..5292
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PDI3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG76882.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
prophage antirepressor-related protein
L2_013_122G1_scaffold_17_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5344..5505
DNA (162bp) protein (54aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=T3GK18_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62174.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5829..6293)
DNA (465bp) protein (155aa)
Putative membrane protein n=3 Tax=Clostridium difficile RepID=T2VGN3_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQI81561.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative membrane protein
L2_013_122G1_scaffold_17_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6429..6746)
DNA (318bp) protein (106aa)
Uncharacterized protein n=61 Tax=Clostridium difficile RepID=G6BZ31_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87704.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_013_122G1_scaffold_17_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7124..7324)
DNA (201bp) protein (67aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6BZ30_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS85689.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_013_122G1_scaffold_17_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7343..7756)
DNA (414bp) protein (138aa)
Uncharacterized protein n=60 Tax=Clostridium difficile RepID=G6BZ29_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG75141.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative membrane protein
L2_013_122G1_scaffold_17_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7740..7973)
DNA (234bp) protein (78aa)
Helix-turn-helix family protein n=196 Tax=Clostridium difficile RepID=T3GK23_CLODC
Transcriptional regulator, HTH-type
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22609.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_013_122G1_scaffold_17_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8192..8566
DNA (375bp) protein (125aa)
Transcriptional regulator, BlaI/MecI/CopY family n=77 Tax=Clostridium difficile RepID=G6BZ27_CLODI
Penicillinase repressor family protein {ECO:0000313|EMBL:EQG75761.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Transcriptional regulator, beta-lactamsrepressor
L2_013_122G1_scaffold_17_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9178..9870
DNA (693bp) protein (231aa)
Transcriptional regulatory family protein n=207 Tax=Clostridium difficile RepID=C9XL82_CLODC
two-component system response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQE62445.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10066..12126
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
His Kinase A domain protein n=92 Tax=Clostridium difficile RepID=T2TD65_CLODI
Two-component sensor histidine kinase
L2_013_122G1_scaffold_17_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12332..12655)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein n=191 Tax=Clostridium difficile RepID=G6BZ23_CLODI
hypothetical protein
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:EQE62425.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12648..13349)
DNA (702bp) protein (234aa)
AzlC family protein n=187 Tax=Clostridium difficile RepID=C9XL79_CLODC
hypothetical protein
AzlC family protein {ECO:0000313|EMBL:EQE62426.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13627..15012)
DNA (1386bp) protein (462aa)
GntR-family transcriptional regulator n=123 Tax=Clostridium difficile RepID=C9XL78_CLODC
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:CKH27375.1}; Putative PLP-dependent transcriptional regulator {ECO:0000313|EMBL:CDS87692.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDS85697.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_122G1_scaffold_17_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15120..16358)
DNA (1239bp) protein (413aa)
BlaR1 peptidase M56 family protein n=2 Tax=Clostridium difficile RepID=T4PE55_CLODI
Putative beta-lactamase inducer {ECO:0000313|EMBL:CCL22603.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
beta-lactamase inducer
L2_013_122G1_scaffold_17_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16371..16706)
DNA (336bp) protein (112aa)
Penicillinase repressor family protein n=24 Tax=Clostridium difficile RepID=T2URV2_CLODI
beta-lactamase repressor
Penicillinase repressor family protein {ECO:0000313|EMBL:EQE62431.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17267..17689)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PL19_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62432.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_013_122G1_scaffold_17_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17784..17936)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3FIP8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87684.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_013_122G1_scaffold_17_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18167..21070
DNA (2904bp) protein (968aa)
AAA domain family protein n=2 Tax=Clostridium difficile RepID=T4PJY5_CLODI
AAA domain family protein {ECO:0000313|EMBL:EQE62439.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Transcription antiterminator, PTS operonregulator
L2_013_122G1_scaffold_17_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21103..21549
DNA (447bp) protein (149aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein n=2 Tax=Clostridium difficile RepID=T4PK32_CLODI
PTS system transporter subunit IIBC
PTS system, fructose/mannitol family IIA component {ECO:0000313|EMBL:CCL30503.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_013_122G1_scaffold_17_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21672..21974
DNA (303bp) protein (101aa)
PTS system, IIb component n=177 Tax=Clostridium difficile RepID=C9XL73_CLODC
PTS system transporter subunit IIB
PTS system, fructose/mannitol family IIB component {ECO:0000313|EMBL:CCK94735.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L2_013_122G1_scaffold_17_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22155..23561
DNA (1407bp) protein (469aa)
PTS system sugar-specific permease component family protein n=145 Tax=Clostridium difficile RepID=T3GGU0_CLODC
PTS system fructose/mannitol family transporter subunit IIC
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQH99085.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_013_122G1_scaffold_17_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23905..24963
DNA (1059bp) protein (353aa)
sugar-phosphate dehydrogenase (EC:1.1.1.-)
Putative sugar-phosphate dehydrogenase {ECO:0000313|EMBL:CAJ69163.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAJ69163.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Zinc-binding dehydrogenase family protein n=37 Tax=Clostridium difficile RepID=T3GII0_CLODC
Displaying items 1-30 of 230 in total

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