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L2_013_122G1_scaffold_24

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Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_24_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(54..410)
DNA (357bp) protein (119aa)
Inner membrane protein yohC n=2 Tax=Escherichia coli RepID=M8RRT6_ECOLX
hypothetical protein
Inner membrane protein yohC {ECO:0000313|EMBL:KDY58267.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_013_122G1_scaffold_24_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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580..1158
DNA (579bp) protein (193aa)
SNARE-like domain protein n=3 Tax=Escherichia coli RepID=V0SLJ4_ECOLX
hypothetical protein
Inner membrane protein yohD {ECO:0000313|EMBL:EZK22155.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L2_013_122G1_scaffold_24_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1288..2049)
DNA (762bp) protein (254aa)
YohF n=67 Tax=Escherichia coli RepID=D6HYP7_ECOLX
acetoin dehydrogenase
YohF {ECO:0000313|EMBL:EFE62746.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_013_122G1_scaffold_24_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2102..3538)
DNA (1437bp) protein (479aa)
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family n=248 Tax=Enterobacteriaceae RepID=A7ZNV6_ECO24
mdtQ; multidrug resistance outer membrane protein MdtQ
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:ENA07245.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L2_013_122G1_scaffold_24_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4233..5183)
DNA (951bp) protein (317aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
tRNA-dihydrouridine synthase n=41 Tax=Escherichia coli RepID=C8TU64_ECO26
dusC; tRNA-dihydrouridine synthase C
L2_013_122G1_scaffold_24_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5422..5820
DNA (399bp) protein (133aa)
UPF0299 membrane protein YohJ n=6 Tax=Escherichia coli RepID=F4SMR9_ECOLX
hypothetical protein
UPF0299 membrane protein YohJ {ECO:0000256|HAMAP-Rule:MF_01144}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_013_122G1_scaffold_24_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5817..6512
DNA (696bp) protein (232aa)
Inner membrane protein YohK n=1002 Tax=Enterobacteriaceae RepID=YOHK_ECOLI
LrgB family protein
Uncharacterized protein {ECO:0000313|EMBL:EID67126.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_013_122G1_scaffold_24_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6642..7526
DNA (885bp) protein (295aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334}; EC=3.5.4.5 {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334};; Cytidine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01558}; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
Cytidine deaminase n=62 Tax=Enterobacteriaceae RepID=CDD_ECO24
L2_013_122G1_scaffold_24_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7676..8395
DNA (720bp) protein (240aa)
Protein SanA n=1318 Tax=Bacteria RepID=SANA_ECO57
hypothetical protein
Protein sanA {ECO:0000313|EMBL:ELE43044.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
L2_013_122G1_scaffold_24_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8398..8637
DNA (240bp) protein (80aa)
Uncharacterized protein YeiS n=1320 Tax=Enterobacteriaceae RepID=YEIS_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA86057.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_013_122G1_scaffold_24_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8956..10194
DNA (1239bp) protein (413aa)
Predicted oxidoreductase n=151 Tax=Escherichia coli RepID=C8TU70_ECO26
putative oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIH47056.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L2_013_122G1_scaffold_24_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10188..11423
DNA (1236bp) protein (412aa)
Dihydroorotate dehydrogenase family protein n=44 Tax=Escherichia coli RepID=A7ZNW9_ECO24
yeiA; dihydropyrimidine dehydrogenase
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:ESA77927.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
L2_013_122G1_scaffold_24_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11494..12504)
DNA (1011bp) protein (337aa)
Galactoside transport system permease protein MglC n=709 Tax=Enterobacteriaceae RepID=MGLC_ECOLI
mglC; Galactoside transport system permease protein mglC
Beta-methylgalactoside transporter permease {ECO:0000313|EMBL:KDV30453.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L2_013_122G1_scaffold_24_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12520..14040)
DNA (1521bp) protein (507aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Galactose/methyl galactoside import ATP-binding protein MglA n=325 Tax=Enterobacteriaceae RepID=MGLA_ECOLI
ABC transporter
L2_013_122G1_scaffold_24_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14101..15099)
DNA (999bp) protein (333aa)
D-galactose-binding periplasmic protein n=1062 Tax=Enterobacteriaceae RepID=DGAL_ECOL6
mglB; galactose ABC transporter periplasmic galactose-binding protein
Methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB {ECO:0000313|EMBL:EJE68609.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L2_013_122G1_scaffold_24_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15379..16419)
DNA (1041bp) protein (347aa)
Galactose operon repressor n=189 Tax=Enterobacteriaceae RepID=B6I8K1_ECOSE
galS; DNA-binding transcriptional regulator GalS
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:KEL86674.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L2_013_122G1_scaffold_24_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16561..17718)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=46 Tax=Enterobacteriaceae RepID=B7M4Z8_ECO8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK25199.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L2_013_122G1_scaffold_24_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17735..18403)
DNA (669bp) protein (223aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
GTP cyclohydrolase 1 n=1414 Tax=Enterobacteriaceae RepID=GCH1_ECO24
folE; GTP cyclohydrolase FolE
L2_013_122G1_scaffold_24_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18661..19497
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase {ECO:0000313|EMBL:KEN97248.1}; EC=3.1.2.12 {ECO:0000313|EMBL:KEN97248.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
S-formylglutathione hydrolase YeiG n=371 Tax=cellular organisms RepID=SFGH2_ECODH
L2_013_122G1_scaffold_24_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19529..21520)
DNA (1992bp) protein (664aa)
Colicin I receptor n=201 Tax=Enterobacteriaceae RepID=CIRA_ECOLI
Catecholate siderophore receptor CirA {ECO:0000313|EMBL:AFH11964.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
cirA; colicin I receptor
L2_013_122G1_scaffold_24_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21813..23282)
DNA (1470bp) protein (490aa)
Lysine-specific permease n=666 Tax=Enterobacteriaceae RepID=LYSP_ECOLI
lysine transporter
Lysine-specific permease {ECO:0000313|EMBL:EOV78300.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_013_122G1_scaffold_24_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23487..24368)
DNA (882bp) protein (294aa)
Uncharacterized HTH-type transcriptional regulator YeiE n=1182 Tax=Enterobacteriaceae RepID=YEIE_ECO57
yeiE; putative DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFK49364.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_013_122G1_scaffold_24_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24467..25516
DNA (1050bp) protein (350aa)
UPF0324 inner membrane protein YeiH n=1158 Tax=Enterobacteriaceae RepID=YEIH_ECO57
hypothetical protein
Putative membrane protein YeiH {ECO:0000313|EMBL:CDK45281.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_013_122G1_scaffold_24_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25590..26447
DNA (858bp) protein (286aa)
nfo; endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Probable endonuclease 4 n=397 Tax=Enterobacteriaceae RepID=END4_ECO24
L2_013_122G1_scaffold_24_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26451..27539
DNA (1089bp) protein (363aa)
Predicted kinase n=269 Tax=Enterobacteriaceae RepID=C8TU84_ECO26
yeiI; kinase
Pyrimidine kinase {ECO:0000313|EMBL:EOV78304.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_013_122G1_scaffold_24_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27595..28845)
DNA (1251bp) protein (417aa)
Nucleoside transporter, NupC family n=154 Tax=Enterobacteriaceae RepID=A7ZNY4_ECO24
yeiJ; nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
L2_013_122G1_scaffold_24_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28945..29886)
DNA (942bp) protein (314aa)
Pyrimidine-specific ribonucleoside hydrolase RihB {ECO:0000256|HAMAP-Rule:MF_01433}; EC=3.2.2.8 {ECO:0000256|HAMAP-Rule:MF_01433};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01433}; TaxID=1400022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D6-113.11.;"
Pyrimidine-specific ribonucleoside hydrolase RihB n=140 Tax=Enterobacteriaceae RepID=RIHB_ECO24
inosine/uridine-preferring nucleoside hydrolase
L2_013_122G1_scaffold_24_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30016..30714
DNA (699bp) protein (233aa)
Regulatory protein Nsr n=4 Tax=Escherichia coli RepID=B3H8W2_ECOLX
Regulatory protein nsr {ECO:0000313|EMBL:EGB89853.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
yeiL; DNA-binding transcriptional activator YeiL
L2_013_122G1_scaffold_24_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30782..32032)
DNA (1251bp) protein (417aa)
Putative pseudouridine transporter n=334 Tax=Enterobacteriaceae RepID=PSUT_ECOLI
psuT; nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_013_122G1_scaffold_24_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32126..33064)
DNA (939bp) protein (313aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Pseudouridine-5'-phosphate glycosidase n=84 Tax=Escherichia coli RepID=A7ZNY8_ECO24
pseudouridine-5'-phosphate glycosidase
Displaying items 1-30 of 176 in total

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