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L2_013_122G1_scaffold_44

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Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_44_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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258..1517
DNA (1260bp) protein (420aa)
Cytosine permease/transport n=342 Tax=Enterobacteriaceae RepID=J7QCK5_ECOLX
codB; cytosine permease
Cytosine permease {ECO:0000313|EMBL:EFK51167.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_013_122G1_scaffold_44_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1507..2790
DNA (1284bp) protein (428aa)
Cytosine deaminase n=279 Tax=Escherichia coli RepID=J7QXN4_ECOLX
codA; cytosine deaminase CodA
Amidohydrolase family protein {ECO:0000313|EMBL:EHX36318.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_013_122G1_scaffold_44_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2830..3729)
DNA (900bp) protein (300aa)
Cyn operon positive regulator n=180 Tax=Enterobacteriaceae RepID=J7Q6A0_ECOLX
cynR; DNA-binding transcriptional regulator CynR
Cyn operon transcriptional activator CynR {ECO:0000313|EMBL:ESD72301.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_013_122G1_scaffold_44_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3839..4498
DNA (660bp) protein (220aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Carbonic anhydrase 1 n=722 Tax=Bacteria RepID=CYNT_ECO57
cynT; carbonic anhydrase
L2_013_122G1_scaffold_44_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4529..4999
DNA (471bp) protein (157aa)
cyanate hydratase (EC:4.2.1.104)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Cyanate hydratase n=453 Tax=Enterobacteriaceae RepID=CYNS_ECO24
L2_013_122G1_scaffold_44_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5005..6186
DNA (1182bp) protein (394aa)
Cyanate transporter n=11 Tax=Escherichia coli RepID=U9Y340_ECOLX
Cyanate transporter {ECO:0000313|EMBL:ESD14801.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
cyanate transporter
L2_013_122G1_scaffold_44_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6265..7518)
DNA (1254bp) protein (418aa)
Lactose/galactose transporter n=14 Tax=Escherichia coli RepID=B7M2Z1_ECO8A
lacY; galactoside permease
Galactoside permease {ECO:0000313|EMBL:ESD14802.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_013_122G1_scaffold_44_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7570..10644)
DNA (3075bp) protein (1025aa)
Beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613}; Short=Beta-gal {ECO:0000256|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|HAMAP-Rule:MF_01687}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Beta-galactosidase n=10 Tax=Escherichia coli RepID=F4UJ70_ECOLX
lacZ; beta-D-galactosidase
L2_013_122G1_scaffold_44_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10767..11858)
DNA (1092bp) protein (364aa)
Transcriptional regulator, LacI family n=120 Tax=Proteobacteria RepID=B1J0T4_ECOLC
lacI; lac repressor
Lactose operon repressor {ECO:0000313|EMBL:EOW27694.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L2_013_122G1_scaffold_44_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11926..12873)
DNA (948bp) protein (316aa)
Transcriptional regulator for mhp operon n=209 Tax=Enterobacteriaceae RepID=J7QCK9_ECOLX
DNA-binding transcriptional activator MhpR
Mhp operon transcriptional activator {ECO:0000313|EMBL:EGU99262.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L2_013_122G1_scaffold_44_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..14614
DNA (1665bp) protein (555aa)
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652}; Short=3-HCI hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; Short=3-HPP hydroxylase {ECO:0000256|HAMAP-Rule:MF_01652};; EC=1.14.13.127 {ECO:0000256|HAMAP-Rule:MF_01652};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase n=23 Tax=Escherichia coli RepID=G1ZUZ7_ECOLX
mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase
L2_013_122G1_scaffold_44_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14616..15560
DNA (945bp) protein (315aa)
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; EC=1.13.11.16 {ECO:0000256|HAMAP-Rule:MF_01653};; 3-carboxyethylcatechol 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01653}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase n=658 Tax=Enterobacteriaceae RepID=MHPB_ECO57
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase
L2_013_122G1_scaffold_44_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15578..16444
DNA (867bp) protein (289aa)
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; EC=3.7.1.14 {ECO:0000256|HAMAP-Rule:MF_01654};; 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase n=464 Tax=Enterobacteriaceae RepID=MHPC_ECO24
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase
L2_013_122G1_scaffold_44_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16454..17263
DNA (810bp) protein (270aa)
2-keto-4-pentenoate hydratase {ECO:0000256|HAMAP-Rule:MF_01655}; EC=4.2.1.80 {ECO:0000256|HAMAP-Rule:MF_01655};; 2-hydroxypentadienoic acid hydratase {ECO:0000256|HAMAP-Rule:MF_01655}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
mhpD; 2-keto-4-pentenoate hydratase (EC:4.2.1.80)
2-keto-4-pentenoate hydratase n=71 Tax=Escherichia coli RepID=D8E1B0_ECOLX
L2_013_122G1_scaffold_44_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17260..18210
DNA (951bp) protein (317aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:AFH10093.1}; EC=1.2.1.10 {ECO:0000313|EMBL:AFH10093.1};; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
Acetaldehyde dehydrogenase n=477 Tax=Enterobacteriaceae RepID=ACDH_ECO24
L2_013_122G1_scaffold_44_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18207..19220
DNA (1014bp) protein (338aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
4-hydroxy-2-oxovalerate aldolase n=550 Tax=Enterobacteriaceae RepID=HOA_ECO24
4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase
L2_013_122G1_scaffold_44_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19396..20607
DNA (1212bp) protein (404aa)
Hydroxy-aromatic acid transporter n=157 Tax=Enterobacteriaceae RepID=B7L509_ECO55
benzoate transport
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KDX37054.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L2_013_122G1_scaffold_44_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20709..21248
DNA (540bp) protein (180aa)
Nucleoprotein/polynucleotide-associated enzyme n=6 Tax=Escherichia RepID=F4SIW9_ECOLX
yaiL; nucleoprotein/polynucleotide-associated enzyme
Nucleoprotein/polynucleotide-associated enzyme {ECO:0000313|EMBL:AHY69016.1}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H28 str. RM12581.;"
L2_013_122G1_scaffold_44_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21373..22206)
DNA (834bp) protein (278aa)
S-formylglutathione hydrolase {ECO:0000313|EMBL:EMU65894.1}; EC=3.1.2.12 {ECO:0000313|EMBL:EMU65894.1};; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
S-formylglutathione hydrolase FrmB n=226 Tax=Enterobacteriaceae RepID=SFGH1_ECO24
frmB; S-formylglutathione hydrolase
L2_013_122G1_scaffold_44_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22299..23408)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
S-(hydroxymethyl)glutathione dehydrogenase n=807 Tax=Enterobacteriaceae RepID=FRMA_ECO24
alcohol dehydrogenase
L2_013_122G1_scaffold_44_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23443..23718)
DNA (276bp) protein (92aa)
UPI0003D653E8 related cluster n=1 Tax=unknown RepID=UPI0003D653E8
hypothetical protein
Transcriptional repressor frmR {ECO:0000313|EMBL:EHU28928.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_013_122G1_scaffold_44_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23903..24676)
DNA (774bp) protein (258aa)
Uncharacterized protein n=64 Tax=Escherichia coli RepID=B6HZY4_ECOSE
yaiO; hypothetical protein
Putative acyl transferase {ECO:0000313|EMBL:KEJ51799.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_013_122G1_scaffold_44_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25237..26433)
DNA (1197bp) protein (399aa)
Glycosyl transferase, group 2 family protein n=186 Tax=Escherichia coli RepID=A7ZIA8_ECO24
yaiP; glucosyltransferase
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:END51433.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L2_013_122G1_scaffold_44_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26443..27114)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=S1FI68_ECOLX
N-acetylglucosaminylphosphatidylinositol deacetylase YaiS
Uncharacterized protein {ECO:0000313|EMBL:EOW10461.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L2_013_122G1_scaffold_44_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27730..28692
DNA (963bp) protein (321aa)
Taurine ABC transporter, periplasmic taurine-binding protein n=164 Tax=Enterobacteriaceae RepID=A7ZX12_ECOHS
tauA; taurine transporter substrate binding subunit
Taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EGU99280.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L2_013_122G1_scaffold_44_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28705..29472
DNA (768bp) protein (256aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Taurine ABC transporter ATP-binding component n=62 Tax=Escherichia coli RepID=B6HZG7_ECOSE
ABC transporter
L2_013_122G1_scaffold_44_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29469..30296
DNA (828bp) protein (276aa)
Taurine uptake ABC transporter, permease protein n=237 Tax=Enterobacteriaceae RepID=A7ZIB3_ECO24
taurine transporter subunit
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:END96021.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_013_122G1_scaffold_44_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30293..31144
DNA (852bp) protein (284aa)
Alpha-ketoglutarate-dependent taurine dioxygenase {ECO:0000313|EMBL:KEO03824.1}; EC=1.14.11.17 {ECO:0000313|EMBL:KEO03824.1};; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Taurine dioxygenase n=145 Tax=Escherichia coli RepID=A7ZX15_ECOHS
tauD; taurine dioxygenase
L2_013_122G1_scaffold_44_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31302..32276)
DNA (975bp) protein (325aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Delta-aminolevulinic acid dehydratase n=24 Tax=Escherichia coli RepID=H9UP27_ECOLX
L2_013_122G1_scaffold_44_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32801..35707
DNA (2907bp) protein (969aa)
Outer membrane autotransporter barrel domain protein n=2 Tax=Escherichia coli RepID=I2VER3_ECOLX
putative autotransporter
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KEJ51886.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Displaying items 1-30 of 155 in total

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