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L2_013_122G1_scaffold_62

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Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_62_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(716..1099)
DNA (384bp) protein (128aa)
General stress protein 13 n=3 Tax=Lactobacillus rhamnosus RepID=C7TAR4_LACRG
yugI; General stress protein 13
General stress protein {ECO:0000313|EMBL:KIC97510.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_62_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1163..1747)
DNA (585bp) protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Lactobacillus rhamnosus RepID=B5QMS1_LACRH
peptidyl-prolyl cis-trans isomerase
L2_013_122G1_scaffold_62_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1982..2968
DNA (987bp) protein (329aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Ferredoxin--NADP reductase n=2 Tax=Lactobacillus rhamnosus RepID=B5QMS0_LACRH
thioredoxin reductase
L2_013_122G1_scaffold_62_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3063..3566
DNA (504bp) protein (168aa)
Phosphatidylglycerophosphatase A related protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QMR9_LACRH
ltrC; low temperature requirement C protein
Low temperature requirement C protein {ECO:0000313|EMBL:AGP73485.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3652..4305
DNA (654bp) protein (218aa)
Uncharacterized membrane-associated protein n=6 Tax=Lactobacillus rhamnosus RepID=B5QMR8_LACRH
dedA; hypothetical protein
DedA {ECO:0000313|EMBL:CAR86703.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41311.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_62_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4367..4999)
DNA (633bp) protein (211aa)
Predicted membrane protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMR7_LACRH
integral membrane protein, Rhodopsin-like GPCR superfamily
Membrane protein {ECO:0000313|EMBL:KIC97515.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_62_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5000..5776)
DNA (777bp) protein (259aa)
Predicted sugar phosphatase of the HAD superfamily protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMR6_LACRH
nagD; HAD superfamily hydrolase
Putative NagD-like phosphatase {ECO:0000313|EMBL:EKS49544.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5785..6441)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6ARU2_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN78777.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Hypothetical protein
L2_013_122G1_scaffold_62_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6496..7872)
DNA (1377bp) protein (459aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMR4_LACRH
5'-nucleotidase family protein in cluster with NagD-like phosphatase
5'-nucleotidase family protein in cluster with NagD-like phosphatase {ECO:0000313|EMBL:EKS49542.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7985..8587)
DNA (603bp) protein (201aa)
Predicted phosphoesterase or phosphohydrolase n=10 Tax=Lactobacillus rhamnosus RepID=B5QMR3_LACRH
phosphoesterase-like protein
Phosphoesterase {ECO:0000313|EMBL:AGP73479.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8589..9326)
DNA (738bp) protein (246aa)
Predicted multitransmembrane protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QMR2_LACRH
hypothetical protein
Putative multitransmembrane protein {ECO:0000313|EMBL:EKS49540.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9323..10390)
DNA (1068bp) protein (356aa)
Predicted multitransmembrane protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMR1_LACRH
Transporter
Transporter {ECO:0000313|EMBL:EKS49539.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10591..10905)
DNA (315bp) protein (105aa)
Uncharacterized protein n=13 Tax=Lactobacillus rhamnosus RepID=C8USE9_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73476.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11016..12356
DNA (1341bp) protein (447aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EKS49537.1}; EC=3.1.4.46 {ECO:0000313|EMBL:EKS49537.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMQ9_LACRH
Glycerophosphoryl diester phosphodiesterase
L2_013_122G1_scaffold_62_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12492..13895
DNA (1404bp) protein (468aa)
Dipeptidase PepV n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMQ8_LACRH
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-related deacylase {ECO:0000313|EMBL:AGP73474.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14038..14787
DNA (750bp) protein (250aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EEN78769.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EEN78769.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Biotin operon repressor n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMQ7_LACRH
biotin operon repressor
L2_013_122G1_scaffold_62_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14804..15487)
DNA (684bp) protein (228aa)
Predicted hydrolase (HAD superfamily) protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QMQ6_LACRH
hydrolase
Hydrolase {ECO:0000313|EMBL:BAI41299.1}; Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:CAR86691.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_62_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15981..18725
DNA (2745bp) protein (915aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:EKS49532.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EKS49532.1};; EC=3.4.-.- {ECO:0000313|EMBL:EKS49532.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Membrane carboxypeptidase (Penicillin-binding protein) n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMS6_LACRH
transglycosylase
L2_013_122G1_scaffold_62_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18887..19888)
DNA (1002bp) protein (334aa)
Catabolite control protein A n=13 Tax=Lactobacillus rhamnosus RepID=B5QMS5_LACRH
ccpA; catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:KIC97528.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_62_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20244..21347
DNA (1104bp) protein (368aa)
Proline dipeptidase n=6 Tax=Lactobacillus rhamnosus RepID=B5QMS4_LACRH
pepQ; Xaa-Pro dipeptidase
Dipeptidase {ECO:0000313|EMBL:KIC97529.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_62_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21501..22034)
DNA (534bp) protein (178aa)
Small molecule binding protein, 3H domain n=7 Tax=Lactobacillus rhamnosus RepID=B5QMS3_LACRH
Transcriptional repressor for NAD biosynthesis
Transcriptional regulator {ECO:0000313|EMBL:CAR86686.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41295.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_62_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22173..22673)
DNA (501bp) protein (167aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TAP2_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86685.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41294.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_62_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22688..23116)
DNA (429bp) protein (143aa)
Methyl-accepting chemotaxis-like protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMQ4_LACRH
hypothetical protein
General stress protein {ECO:0000313|EMBL:AGP73465.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23511..24395
DNA (885bp) protein (295aa)
Small-conductance mechanosensitive channel n=6 Tax=Lactobacillus rhamnosus RepID=B5QMQ2_LACRH
Potassium efflux system KefA protein/Small-conductance mechanosensitive channel
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EKS49524.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24447..25349
DNA (903bp) protein (301aa)
Predicted membrane protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMQ1_LACRH
Membrane protein
Membrane protein {ECO:0000313|EMBL:AGP73461.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_62_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25401..25886)
DNA (486bp) protein (162aa)
CBS domain containing protein n=7 Tax=Lactobacillus rhamnosus RepID=B5QMP9_LACRH
CBS domain containing protein
CBS domain protein {ECO:0000313|EMBL:EKS49522.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_62_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26173..26904
DNA (732bp) protein (244aa)
Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) n=4 Tax=Lactobacillus rhamnosus RepID=B5QMP8_LACRH
glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:BAI41288.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_62_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26997..27521)
DNA (525bp) protein (175aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Predicted phosphoesterase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMP7_LACRH
putative phosphoesterase
L2_013_122G1_scaffold_62_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(27518..28972)
DNA (1455bp) protein (485aa)
Glutamate racemase {ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.- {ECO:0000256|SAAS:SAAS00274607};; EC=5.1.1.3 {ECO:0000256|SAAS:SAAS00041166};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family protein n=5 Tax=Lactobacillus rhamnosus RepID=B5QMP6_LACRH
Glutamate racemase/Nucleoside 5-triphosphatase RdgB
L2_013_122G1_scaffold_62_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29267..29749
DNA (483bp) protein (161aa)
Predicted hydrocarbon binding protein, V4R domain n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMP5_LACRH
Hypothetical protein
Hydrocarbon-binding protein {ECO:0000313|EMBL:KIC97539.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 256 in total

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