ggKbase home page

L2_013_122G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_106_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(161..1345)
DNA (1185bp) protein (395aa)
Transposase, mutator type n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU11_BIFLJ
Mutator type transposase {ECO:0000313|EMBL:KFI97141.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
transposase
L2_013_122G1_scaffold_106_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1882..3531)
DNA (1650bp) protein (550aa)
Putative transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKM5_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:KFI97140.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative transcriptional regulator
L2_013_122G1_scaffold_106_3
unknown

Not on your lists

comp(3617..4108)
DNA (492bp) protein (164aa)
ribonuclease
L2_013_122G1_scaffold_106_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4512..5597)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQ68_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM01170.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_013_122G1_scaffold_106_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5655..6146
DNA (492bp) protein (164aa)
PF13274 family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKB4_9BIFI
CPW-WPC domain-containing protein {ECO:0000313|EMBL:KIM01171.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_013_122G1_scaffold_106_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7267..8832
DNA (1566bp) protein (522aa)
Chain length determinant protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H175_9BIFI
Chain length determinant protein {ECO:0000313|EMBL:CCY18707.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
lipopolysaccharide biosynthesis
L2_013_122G1_scaffold_106_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8863..10350
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7K5_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76781.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_106_8
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10469..12133
DNA (1665bp) protein (555aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=2 Tax=Bifidobacterium RepID=A7A7K4_BIFAD
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CCY17883.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_013_122G1_scaffold_106_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12284..14071
DNA (1788bp) protein (596aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A7K3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KIM01173.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_013_122G1_scaffold_106_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14305..14793
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H569_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI97134.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_013_122G1_scaffold_106_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15271..16266)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A348_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF40131.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_106_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16425..16829)
DNA (405bp) protein (135aa)
Thioredoxin n=2 Tax=Bifidobacterium adolescentis RepID=A1A347_BIFAA
trxA2; thioredoxin
Thioredoxin {ECO:0000313|EMBL:BAF40130.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_106_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17027..17647
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A346_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF40129.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_106_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17720..18580
DNA (861bp) protein (287aa)
Possible alpha beta hydrolase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GK30_9BIFI
Alpha/beta hydrolase {ECO:0000313|EMBL:KIM01747.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative alpha beta hydrolase
L2_013_122G1_scaffold_106_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18728..19825
DNA (1098bp) protein (366aa)
Phosphohydrolase {ECO:0000313|EMBL:KFI97129.1}; EC=3.6.1.22 {ECO:0000313|EMBL:KFI97129.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKQ0_9BIFI
hypothetical protein
L2_013_122G1_scaffold_106_16
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19975..21807
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GK36_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY17805.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
putative ErfK/YbiS/YcfS/YnhG superfamily protein
L2_013_122G1_scaffold_106_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21854..22267
DNA (414bp) protein (138aa)
Glycine cleavage system H protein n=3 Tax=Bifidobacterium RepID=A1A342_BIFAA
gcvH; glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_106_18
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22475..23752
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKQ6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY17808.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L2_013_122G1_scaffold_106_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23826..26351
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQ05_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY17809.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
peptidase S9
L2_013_122G1_scaffold_106_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26715..33548
DNA (6834bp) protein (2278aa)
Conserved repeat protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GK42_9BIFI
Conserved repeat protein {ECO:0000313|EMBL:CCY17810.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L2_013_122G1_scaffold_106_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33545..37957
DNA (4413bp) protein (1471aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7I7_BIFAD
pullulanase
L2_013_122G1_scaffold_106_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38171..39211
DNA (1041bp) protein (347aa)
3-isopropylmalate dehydrogenase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A338_BIFAA
3-isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:AII76794.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_106_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39389..40276
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A337_BIFAA
TM2 domain containing protein
TM2 domain containing protein {ECO:0000313|EMBL:AII76795.1}; Uncharacterized protein {ECO:0000313|EMBL:KIM01741.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_106_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40276..41613
DNA (1338bp) protein (446aa)
Biotin/lipoate A/B protein ligase family protein n=2 Tax=Bifidobacterium RepID=A7A7I3_BIFAD
Ligase {ECO:0000313|EMBL:KIM01740.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
snoP; lipoate protein ligase
L2_013_122G1_scaffold_106_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41705..42445
DNA (741bp) protein (247aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Bifidobacterium RepID=A7A7I2_BIFAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KFI97121.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_013_122G1_scaffold_106_26
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42570..44894
DNA (2325bp) protein (775aa)
Transglycosylase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZ06_9BIFI
Transglycosylase {ECO:0000313|EMBL:CCY17816.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
penicillin-binding protein
L2_013_122G1_scaffold_106_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45107..46228
DNA (1122bp) protein (374aa)
Oxidoreductase, FAD/FMN-binding protein n=2 Tax=Bifidobacterium adolescentis RepID=A7A7I0_BIFAD
baiC; NADH-dependent flavin oxidoreductase YqjM
Probable NADH-dependent flavin oxidoreductase YqjM {ECO:0000313|EMBL:BAF40116.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_106_28
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46480..47628)
DNA (1149bp) protein (383aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Dihydroorotate dehydrogenase 2 n=2 Tax=Bifidobacterium RepID=C0BRS8_9BIFI
putative dihydroorotate oxidase
L2_013_122G1_scaffold_106_29
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47831..48634
DNA (804bp) protein (268aa)
Transcriptional regulator, DeoR family n=3 Tax=Bifidobacterium RepID=A7A7H8_BIFAD
DeoR-type transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:KFI90781.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L2_013_122G1_scaffold_106_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48639..49889
DNA (1251bp) protein (417aa)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A330_BIFAA
galactose-1-phosphate uridylyltransferase
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AII76802.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 65 in total

View Taxonomy