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L2_013_122G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_122_1
unknown

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209..352
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_122G1_scaffold_122_2
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(480..1100)
DNA (621bp) protein (207aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT97_TEPAE
Transcriptional modulator of MazE/toxin, MazF
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:CCP27444.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L2_013_122G1_scaffold_122_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1552..2781
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33287.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_013_122G1_scaffold_122_4
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2840..4012)
DNA (1173bp) protein (391aa)
Putative macrolide glycosyltransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRQ6_OSCVS
putative macrolide glycosyltransferase
Putative macrolide glycosyltransferase {ECO:0000313|EMBL:BAK99922.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_013_122G1_scaffold_122_5
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4029..4238)
DNA (210bp) protein (70aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP95_9CLOT
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EET88973.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
looped-hinge helix DNA binding domain, AbrB family
L2_013_122G1_scaffold_122_6

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comp(4428..6311)
DNA (1884bp) protein (628aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V967_CLOSS
Uncharacterized protein {ECO:0000313|EMBL:ETJ21942.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_122G1_scaffold_122_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6313..7137)
DNA (825bp) protein (275aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRJ2_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA81279.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_013_122G1_scaffold_122_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7183..8784)
DNA (1602bp) protein (534aa)
vesicle-fusing ATPase (EC:3.6.4.6)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037F7D1F
Tax=BJP_IG2157_Clostridiales_52_13
L2_013_122G1_scaffold_122_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9608..11557
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YC92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18225.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA invertase Pin-like protein
L2_013_122G1_scaffold_122_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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11547..12104
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43342.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_013_122G1_scaffold_122_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(12195..12650)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43340.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_122_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(12622..12852)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R354_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43338.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
putative transcriptional regulator
L2_013_122G1_scaffold_122_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(12956..13408)
DNA (453bp) protein (151aa)
Adenylate cyclase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJV2_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDC43336.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
adenylate cyclase
L2_013_122G1_scaffold_122_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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13502..14035
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43334.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_122_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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14134..14691
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43331.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DJ-1 family protein
L2_013_122G1_scaffold_122_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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14824..16134
DNA (1311bp) protein (437aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDE1_9FIRM
trigger factor
L2_013_122G1_scaffold_122_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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16167..16748
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9L8_9FIRM
L2_013_122G1_scaffold_122_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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16868..18169
DNA (1302bp) protein (434aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDD7_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_122G1_scaffold_122_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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18196..20520
DNA (2325bp) protein (775aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5U2_9FIRM
L2_013_122G1_scaffold_122_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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20546..21145
DNA (600bp) protein (200aa)
Probable GTP-binding protein EngB n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9L0_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L2_013_122G1_scaffold_122_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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21147..22334
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43314.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
HAD family hydrolase
L2_013_122G1_scaffold_122_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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22349..23194
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9K5_9FIRM
ABC-type cobalt transport system, ATPase component
L2_013_122G1_scaffold_122_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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23185..24042
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDC8_9FIRM
ABC-type cobalt transport system, ATPase component
L2_013_122G1_scaffold_122_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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24039..24839
DNA (801bp) protein (267aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9K1_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L2_013_122G1_scaffold_122_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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24859..25626
DNA (768bp) protein (256aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5S6_9FIRM
L2_013_122G1_scaffold_122_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(25613..26485)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43302.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_122_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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26683..26952
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43300.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_122_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(27014..27214)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=4 Tax=Firmicutes RepID=C9L9Z6_BLAHA
Cold shock-like protein cspLA {ECO:0000313|EMBL:CDC43298.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cold-shock DNA-binding protein family
L2_013_122G1_scaffold_122_29
unknown

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27262..27429
DNA (168bp) protein (56aa)

This feature has no annotations

L2_013_122G1_scaffold_122_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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27484..28779
DNA (1296bp) protein (432aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Dihydroorotase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5R8_9FIRM
dihydroorotase
Displaying items 1-30 of 103 in total

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