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L2_013_122G1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_132_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(684..2978)
DNA (2295bp) protein (765aa)
Alpha-galactosidase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKJ0_LACRH
alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:AGP73718.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_132_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3191..4075)
DNA (885bp) protein (295aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI9_LACRH
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAI41483.1}; Phospho-beta-glycosidase {ECO:0000313|EMBL:CAR86895.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4072..5028)
DNA (957bp) protein (319aa)
Lipopolysaccharide biosynthesis glycosyltransferase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI8_LACRH
Lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EKS51707.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
glycosyl transferase family 8 domain protein
L2_013_122G1_scaffold_132_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5029..5868)
DNA (840bp) protein (280aa)
Lipopolysaccharide biosynthesis glycosyltransferase n=3 Tax=Lactobacillus rhamnosus RepID=B5QKI7_LACRH
Lipopolysaccharide biosynthesis glycosyltransferase {ECO:0000313|EMBL:EKS51706.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
glycosyl transferase family 8 domain protein
L2_013_122G1_scaffold_132_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5865..6629)
DNA (765bp) protein (255aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI6_LACRH
arbV; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EKS51705.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_132_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6662..8026)
DNA (1365bp) protein (455aa)
Gamma-aminobutyrate permease related permease n=8 Tax=Lactobacillus rhamnosus RepID=B5QKI5_LACRH
amino acid permease family protein
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:AGP73713.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_132_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8241..8696)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI4_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73712.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_132_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8965..9978)
DNA (1014bp) protein (338aa)
Adenine-specific DNA methylase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI3_LACRH
DNA methylase
Adenine-specific DNA methylase {ECO:0000313|EMBL:CAR86889.1}; DNA methylase {ECO:0000313|EMBL:BAI41477.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10281..10604)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI2_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51700.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L2_013_122G1_scaffold_132_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10601..11068)
DNA (468bp) protein (156aa)
Competence protein ComGC n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKI1_LACRH
type II secretory pathway/competence component/Competence protein ComGC
Competence protein ComGC {ECO:0000313|EMBL:AGP73709.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_132_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11028..11363)
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=K8QAM7_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51698.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L2_013_122G1_scaffold_132_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11309..11731)
DNA (423bp) protein (141aa)
Competence protein ComGC n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH9_LACRH
Type II secretory pathway/competence component/Competence protein ComGC {ECO:0000313|EMBL:EKS51697.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
competence protein ComGC
L2_013_122G1_scaffold_132_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11728..12048)
DNA (321bp) protein (107aa)
Competence protein ComGC n=8 Tax=Lactobacillus rhamnosus RepID=B5QKH8_LACRH
gomGC; type II secretory pathway/competence component/Competence protein ComGC
Competence protein ComGC {ECO:0000313|EMBL:EKS51696.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_132_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12051..13004)
DNA (954bp) protein (318aa)
Type II secretory pathway/competence component n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH7_LACRH
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:BAI41472.1}; Type II secretory pathway/competence component {ECO:0000313|EMBL:CAR86883.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13001..13870)
DNA (870bp) protein (290aa)
Type II secretory pathway/competence component, ATPase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH6_LACRH
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:BAI41471.1}; Type II secretory pathway/competence component,ATPase {ECO:0000313|EMBL:CAR86882.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14247..14978)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein LRH_05549 n=13 Tax=Lactobacillus rhamnosus RepID=B5QKH5_LACRH
hypothetical protein
Probable transcriptional regulatory protein LOCK908_1061 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_132_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15049..15540)
DNA (492bp) protein (164aa)
Predicted integral membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QKH4_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51692.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_132_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15614..17419
DNA (1806bp) protein (602aa)
Oligoendopeptidase F n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH3_LACRH
oligoendopeptidase, pepF/M3 family protein
Oligoendopeptidase {ECO:0000313|EMBL:KIC98847.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_132_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17569..19380)
DNA (1812bp) protein (604aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH2_LACRH
D-fructose-6-phosphate amidotransferase
L2_013_122G1_scaffold_132_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19809..21173)
DNA (1365bp) protein (455aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Phosphoglucosamine mutase n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH1_LACRH
glmM; phosphoglucosamine mutase
L2_013_122G1_scaffold_132_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21202..22299)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKH0_LACRH
ybbR-like family protein
Putative secreted protein {ECO:0000313|EMBL:EKS51688.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_132_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22296..23153)
DNA (858bp) protein (286aa)
Conserved membrane protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TB82_LACRG
ossG; membrane protein
Membrane protein {ECO:0000313|EMBL:KIC98843.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_132_23
unknown

Not on your lists

comp(23126..23299)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_013_122G1_scaffold_132_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23417..24151
DNA (735bp) protein (245aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKG8_LACRH
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKS51686.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
multidrug ABC transporter ATP-binding component
L2_013_122G1_scaffold_132_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24141..25280
DNA (1140bp) protein (380aa)
ABC-type multidrug transport system, permease component n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKG7_LACRH
ABC transporter, permease protein
ABC transporter, multidrug transporter permease component {ECO:0000313|EMBL:CAR86873.1}; Multidrug ABC transporter permease {ECO:0000313|EMBL:BAI41462.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25314..25994
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKG6_LACRH
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEN80742.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_122G1_scaffold_132_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26070..28862
DNA (2793bp) protein (931aa)
Cation transport ATPase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TB78_LACRG
cation transport ATPase
Cation transport ATPase {ECO:0000313|EMBL:BAI41460.1}; Cation-transporting ATPase {ECO:0000313|EMBL:CAR86871.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_132_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28993..29184)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKG5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51682.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Hypothetical protein
L2_013_122G1_scaffold_132_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29445..29711
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QKG4_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51681.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Hypothetical protein
L2_013_122G1_scaffold_132_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30164..31237)
DNA (1074bp) protein (358aa)
Spermidine/putrescine-binding periplasmic protein n=10 Tax=Lactobacillus rhamnosus RepID=B5QKG3_LACRH
spermidine/putrescine ABC transporter substrate binding component
ABC transporter, spermidine/putrescine-binding protein {ECO:0000313|EMBL:CAR86867.1}; Spermidine/putrescine ABC transporter substrate binding component {ECO:0000313|EMBL:BAI41456.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Displaying items 1-30 of 151 in total

View Taxonomy