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L2_013_122G1_scaffold_152

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_152_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(278..1117)
DNA (840bp) protein (280aa)
HTH-type transcriptional regulator HdfR n=523 Tax=Enterobacteriaceae RepID=HDFR_ECO24
yifA; HTH-type transcriptional regulator hdfR
HTH-type transcriptional regulator HdfR {ECO:0000256|HAMAP-Rule:MF_01233}; H-NS-dependent flhDC regulator {ECO:0000256|HAMAP-Rule:MF_01233}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
L2_013_122G1_scaffold_152_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1236..1574
DNA (339bp) protein (113aa)
UPF0438 protein YifE n=1447 Tax=Bacteria RepID=YIFE_ECO57
hypothetical protein
Protein yifE {ECO:0000313|EMBL:EFW51078.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L2_013_122G1_scaffold_152_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1599..3119)
DNA (1521bp) protein (507aa)
Mg chelatase-like protein n=1 Tax=Escherichia coli MS 145-7 RepID=E1ITK2_ECOLX
ATP-dependent protease
ATP-dependent protease {ECO:0000313|EMBL:EZE54360.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
L2_013_122G1_scaffold_152_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3710..5356
DNA (1647bp) protein (549aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
acetolactate synthase 2 catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=97 Tax=Escherichia coli RepID=B6I4A5_ECOSE
L2_013_122G1_scaffold_152_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5353..5616
DNA (264bp) protein (88aa)
Acetolactate synthase isozyme 2 small subunit {ECO:0000313|EMBL:EMX82252.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EMX82252.1};; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
Acetolactate synthase isozyme 2 small subunit n=1421 Tax=Enterobacteriaceae RepID=ILVM_ECOL6
acetolactate synthase isozyme, small subunit
L2_013_122G1_scaffold_152_6
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5636..6565
DNA (930bp) protein (310aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIQ24508.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EIQ24508.1};; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
Branched-chain-amino-acid aminotransferase n=1184 Tax=Enterobacteriaceae RepID=ILVE_ECO57
ilvE; branched-chain amino-acid aminotransferase
L2_013_122G1_scaffold_152_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6630..8480
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=242 Tax=Enterobacteriaceae RepID=ILVD_ECO24
L2_013_122G1_scaffold_152_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8483..10027
DNA (1545bp) protein (515aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
Threonine deaminase (Dehydratase) n=723 Tax=Enterobacteriaceae RepID=J7QIT5_ECOLX
ilvA; Threonine deaminase
L2_013_122G1_scaffold_152_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10024..10914)
DNA (891bp) protein (297aa)
HTH-type transcriptional regulator IlvY n=202 Tax=Enterobacteriaceae RepID=ILVY_ECOLI
ilvY; DNA-binding transcriptional regulator IlvY
HTH-type transcriptional activator IlvY {ECO:0000313|EMBL:ESD81112.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L2_013_122G1_scaffold_152_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11064..12539
DNA (1476bp) protein (492aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
Ketol-acid reductoisomerase n=2 Tax=Escherichia coli RepID=U9Z3C7_ECOLX
L2_013_122G1_scaffold_152_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12626..12907)
DNA (282bp) protein (94aa)
ppiC; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Peptidyl-prolyl cis-trans isomerase C n=1296 Tax=Enterobacteriaceae RepID=PPIC_ECO57
L2_013_122G1_scaffold_152_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13106..13555)
DNA (450bp) protein (150aa)
Uncharacterized protein n=69 Tax=Escherichia coli RepID=C8TYS9_ECO10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX22468.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_013_122G1_scaffold_152_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13772..15793
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
ATP-dependent DNA helicase rep n=405 Tax=Escherichia coli RepID=C3SKS7_ECOLX
ATP-dependent DNA helicase Rep
L2_013_122G1_scaffold_152_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15840..17324)
DNA (1485bp) protein (495aa)
gpp; guanosine pentaphosphate phosphohydrolase (EC:3.6.1.40 3.6.1.11)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};; Guanosine pentaphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; pppGpp-5'-phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=279 Tax=Enterobacteriaceae RepID=GPPA_ECO24
L2_013_122G1_scaffold_152_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17458..18723)
DNA (1266bp) protein (422aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
ATP-dependent RNA helicase RhlB n=946 Tax=Enterobacteriaceae RepID=RHLB_ECO24
DEAD/DEAH box helicase
L2_013_122G1_scaffold_152_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18854..19183
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Escherichia coli MS 21-1 RepID=D8ADY2_ECOLX
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
L2_013_122G1_scaffold_152_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19510..20769
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Transcription termination factor Rho n=1427 Tax=Enterobacteriaceae RepID=RHO_ECO57
rho; transcription termination factor
L2_013_122G1_scaffold_152_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20779..20997
DNA (219bp) protein (73aa)
Uncharacterized protein n=122 Tax=Enterobacteriaceae RepID=B7NTF9_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU20739.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L2_013_122G1_scaffold_152_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21009..22112
DNA (1104bp) protein (368aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=802 Tax=Enterobacteriaceae RepID=WECA_ECOL6
rfe; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:BAG79591.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
L2_013_122G1_scaffold_152_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22124..23170
DNA (1047bp) protein (349aa)
Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein n=171 Tax=Escherichia coli RepID=B7L8C7_ECO55
lipopolysaccharide biosynthesis protein WzzE
Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein {ECO:0000313|EMBL:CCQ31425.2}; Lipopolysaccharide biosynthesis protein WzzE {ECO:0000313|EMBL:KHJ17225.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_013_122G1_scaffold_152_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23226..24356
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EHU20742.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EHU20742.1};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
UDP-N-acetylglucosamine 2-epimerase n=475 Tax=Enterobacteriaceae RepID=E2QHW2_ECOLX
L2_013_122G1_scaffold_152_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24353..25615
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=295 Tax=Enterobacteriaceae RepID=A7ZTY9_ECO24
wecC; UDP-N-acetyl-D-mannosamine dehydrogenase
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:ETD63076.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
L2_013_122G1_scaffold_152_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25615..26682
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
dTDP-glucose 4,6-dehydratase n=213 Tax=Escherichia coli RepID=J7R809_ECOLX
dTDP-glucose 4,6-dehydratase
L2_013_122G1_scaffold_152_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26701..27582
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
Glucose-1-phosphate thymidylyltransferase 2 n=816 Tax=Enterobacteriaceae RepID=RMLA2_ECOLI
glucose-1-phosphate thymidylyltransferase
L2_013_122G1_scaffold_152_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27560..28234
DNA (675bp) protein (225aa)
TDP-fucosamine acetyltransferase n=267 Tax=Enterobacteriaceae RepID=B7L8C9_ECO55
TDP-fucosamine acetyltransferase
TDP-D-fucosamine acetyltransferase {ECO:0000313|EMBL:EMU66371.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L2_013_122G1_scaffold_152_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28239..29369
DNA (1131bp) protein (377aa)
TDP-4-oxo-6-deoxy-D-glucose transaminase n=358 Tax=Enterobacteriaceae RepID=B7L8D3_ECO55
TDP-4-oxo-6-deoxy-D-glucose transaminase
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:ESA86912.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_013_122G1_scaffold_152_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29371..30621
DNA (1251bp) protein (417aa)
PST family polysaccharide transporter n=33 Tax=Escherichia coli RepID=D6I348_ECOLX
PST family polysaccharide transporter {ECO:0000313|EMBL:EFE60926.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
O-antigen translocase
L2_013_122G1_scaffold_152_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30618..31697
DNA (1080bp) protein (360aa)
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151893}; EC=2.4.1.325 {ECO:0000256|HAMAP-Rule:MF_01002, ECO:0000256|SAAS:SAAS00151892};; 4-alpha-L-fucosyltransferase {ECO:0000256|HAMAP-Rule:MF_01002}; TDP-Fuc4NAc:lipid II Fuc4NAc transferase {ECO:0000256|HAMAP-Rule:MF_01002}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
4-alpha-L-fucosyltransferase n=164 Tax=Enterobacteriaceae RepID=WECF_ECO24
4-alpha-L-fucosyltransferase
L2_013_122G1_scaffold_152_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31694..33046
DNA (1353bp) protein (451aa)
Putative ECA polymerase n=188 Tax=Enterobacteriaceae RepID=WZYE_ECO8A
wzyE; putative common antigen polymerase
Probable ECA polymerase {ECO:0000256|HAMAP-Rule:MF_01003, ECO:0000256|SAAS:SAAS00275810}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L2_013_122G1_scaffold_152_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33049..33789
DNA (741bp) protein (247aa)
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014171}; Short=UDP-ManNAcA transferase {ECO:0000256|HAMAP-Rule:MF_01001};; EC=2.4.1.180 {ECO:0000256|HAMAP-Rule:MF_01001, ECO:0000256|SAAS:SAAS00014176};; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
UDP-N-acetyl-D-mannosaminuronic acid transferase n=701 Tax=Enterobacteriaceae RepID=WECG_ECO24
wecG; Putative UDP-N-acetyl-D-mannosaminuronic acid transferase
Displaying items 1-30 of 83 in total

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