ggKbase home page

L2_013_122G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_178_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
IS30 family transposase n=1 Tax=Lactobacillus casei M36 RepID=K6RDJ3_LACCA
transposase
IS30 family transposase {ECO:0000313|EMBL:EKP96516.1}; Flags: Fragment;; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
L2_013_122G1_scaffold_178_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(291..1655)
DNA (1365bp) protein (455aa)
M protein trans-acting positive regulator (MGA) n=2 Tax=Lactobacillus rhamnosus RepID=C2JTE4_LACRH
M protein trans-acting positive regulator (MGA) {ECO:0000313|EMBL:EEN81720.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L2_013_122G1_scaffold_178_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1642..1863)
DNA (222bp) protein (74aa)
Uncharacterized protein n=6 Tax=Lactobacillus rhamnosus RepID=S4ZRB5_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS50642.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_178_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1944..3023)
DNA (1080bp) protein (360aa)
Cell surface protein n=5 Tax=Lactobacillus rhamnosus RepID=B5QQU8_LACRH
Cell surface protein precursor
Cell surface protein {ECO:0000313|EMBL:CAR86079.1}; Putative cell surface protein {ECO:0000313|EMBL:BAI40711.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3165..3974)
DNA (810bp) protein (270aa)
Cell surface protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFM7_LACRL
ubiD; ubiD family decarboxylase
Cell surface protein {ECO:0000313|EMBL:KIC98593.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_178_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3977..4297)
DNA (321bp) protein (107aa)
Conserved extracellular protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T8Y4_LACRG
extracellular protein
Uncharacterized protein {ECO:0000313|EMBL:KIC98594.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_178_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4312..6300)
DNA (1989bp) protein (663aa)
Flagellar hook-length control protein FliK n=2 Tax=Lactobacillus rhamnosus RepID=K8Q9P6_LACRH
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:EKS50646.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L2_013_122G1_scaffold_178_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6762..7337
DNA (576bp) protein (192aa)
Alanine acetyl transferase n=12 Tax=Lactobacillus rhamnosus RepID=C7T8Y2_LACRG
yoaA; alanine acetyl transferase
Alanine acetyltransferase {ECO:0000313|EMBL:KIC98595.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_178_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7504..7800)
DNA (297bp) protein (99aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFM3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP72861.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_178_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7991..8968
DNA (978bp) protein (326aa)
Glyoxalase family protein n=3 Tax=Lactobacillus rhamnosus RepID=S4ZSK7_LACRH
Glyoxalase family protein
Glyoxalase {ECO:0000313|EMBL:BAI40705.1}; Glyoxalase family protein {ECO:0000313|EMBL:CAR86073.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9187..10059)
DNA (873bp) protein (291aa)
Transcriptional regulator, LysR family n=2 Tax=Lactobacillus rhamnosus RepID=S4ZRB3_LACRH
Transcriptional regulator, LysR family
Transcriptional regulator {ECO:0000313|EMBL:EPC88270.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_013_122G1_scaffold_178_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10180..11523
DNA (1344bp) protein (448aa)
Conserved membrane protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T8X8_LACRG
putative transporter protein
Conserved membrane protein {ECO:0000313|EMBL:CAR86071.1}; Putative transporter protein {ECO:0000313|EMBL:BAI40703.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11516..13219
DNA (1704bp) protein (568aa)
NADH oxidase (Putative) n=2 Tax=Lactobacillus rhamnosus RepID=B5QQT9_LACRH
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:BAI40702.1}; Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CAR86070.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
naoX; pyridine nucleotide-disulfide oxidoreductase family protein
L2_013_122G1_scaffold_178_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13304..14083
DNA (780bp) protein (260aa)
Taurine transport system permease protein tauC n=2 Tax=Lactobacillus rhamnosus RepID=B5QQT8_LACRH
tauC; taurine transport system permease
Taurine ABC transporter permease component {ECO:0000313|EMBL:BAI40701.1}; Taurine transport system permease protein {ECO:0000313|EMBL:CAR86069.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14093..15079
DNA (987bp) protein (329aa)
Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QQT7_LACRH
taurine ABC transporter substrate binding component
ABC transporter, aliphatic sulfonates family ligand-binding protein {ECO:0000313|EMBL:CAR86068.1}; Taurine ABC transporter substrate binding component {ECO:0000313|EMBL:BAI40700.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15089..15820
DNA (732bp) protein (244aa)
Taurine ABC transporter, ATP-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QQT6_LACRH
taurine ABC transporter ATP-binding component
ABC transporter, taurine transporter ATP-binding protein {ECO:0000313|EMBL:CAR86067.1}; Taurine ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI40699.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16328..16768)
DNA (441bp) protein (147aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T8X3_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ03337.1}; TaxID=1051652 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 32G.;"
L2_013_122G1_scaffold_178_18
unknown

Not on your lists

comp(16746..17090)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7T8X2_LACRG
hypothetical protein
L2_013_122G1_scaffold_178_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17133..17456)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QQT4_LACRH
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86064.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40696.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17592..19049)
DNA (1458bp) protein (486aa)
Xanthine/uracil/vitamin C permease n=10 Tax=Lactobacillus rhamnosus RepID=B5QQT3_LACRH
Guanine-hypoxanthine permease
Guanine-hypoxanthine permease {ECO:0000313|EMBL:EKS50652.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_178_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19243..19593
DNA (351bp) protein (117aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T8W9_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86062.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40694.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19635..20003
DNA (369bp) protein (123aa)
Predicted membrane protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QQT1_LACRH
membrane protein
Conserved membrane protein {ECO:0000313|EMBL:CAR86061.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40693.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20049..20345
DNA (297bp) protein (99aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T8W7_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86060.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40692.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20418..21155)
DNA (738bp) protein (246aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=B5QQS9_LACRH
yydk; GntR family transcriptional regulator
Putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family {ECO:0000313|EMBL:EKS50656.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_178_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21380..22816)
DNA (1437bp) protein (479aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=2 Tax=Lactobacillus rhamnosus RepID=B5QQS8_LACRH
6-phospho-beta-glucosidase
6-phospho-beta-glucosidase {ECO:0000313|EMBL:BAI40690.1}; 6-phospho-beta-glucosidase (GH1) {ECO:0000313|EMBL:CAR86058.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22862..24226)
DNA (1365bp) protein (455aa)
Cellobiose phosphotransferase system IIC component n=2 Tax=Lactobacillus rhamnosus RepID=B5QQS7_LACRH
PTS system cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_178_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24249..24743)
DNA (495bp) protein (165aa)
PTS system, cellobiose-specific IIC component n=3 Tax=Lactobacillus rhamnosus RepID=C7TFL3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP72851.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_178_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24763..25086)
DNA (324bp) protein (108aa)
PTS system cellobiose-specific IIA component {ECO:0000313|EMBL:EKS50660.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS50660.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system, cellobiose-specific IIA component n=2 Tax=Lactobacillus rhamnosus RepID=K8QEU4_LACRH
PTS system cellobiose-specific transporter subunit IIA
L2_013_122G1_scaffold_178_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25096..25410)
DNA (315bp) protein (105aa)
PTS system cellobiose-specific transporter subunit IIB n=1 Tax=Lactobacillus rhamnosus MTCC 5462 RepID=F3MZM8_LACRH
PTS system cellobiose-specific transporter subunit IIB {ECO:0000313|EMBL:EGF35243.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
PTS system, Lactose/Cellobiose specific IIB subunit
L2_013_122G1_scaffold_178_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25692..26693)
DNA (1002bp) protein (334aa)
Lactate dehydrogenase n=2 Tax=Lactobacillus rhamnosus RepID=B5QQS3_LACRH
ldhD; D-lactate dehydrogenase
D-lactate dehydrogenase {ECO:0000313|EMBL:BAI40685.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Displaying items 1-30 of 90 in total

View Taxonomy