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L2_013_122G1_scaffold_224

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_224_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(569..1339)
DNA (771bp) protein (257aa)
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily n=3 Tax=Clostridiales RepID=B0A618_9FIRM
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily {ECO:0000313|EMBL:EDQ97912.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sigB; RNA polymerase sigma-B factor
L2_013_122G1_scaffold_224_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1339..1746)
DNA (408bp) protein (136aa)
Putative anti-sigma B factor n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGP9_9CLOT
Putative anti-sigma B factor {ECO:0000313|EMBL:CDA11554.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
anti-sigma-B factor (serine-protein kinase)
L2_013_122G1_scaffold_224_3

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comp(1749..2066)
DNA (318bp) protein (106aa)
Anti-sigma factor antagonist n=2 Tax=Clostridiales RepID=B0A620_9FIRM
Stage II sporulation protein {ECO:0000313|EMBL:ETJ17106.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
anti-sigma-B factor antagonist
L2_013_122G1_scaffold_224_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2092..2349)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A621_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97915.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_013_122G1_scaffold_224_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2349..2633)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A622_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97916.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_013_122G1_scaffold_224_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2853..5282)
DNA (2430bp) protein (810aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Clostridiales RepID=B0A623_9FIRM
L2_013_122G1_scaffold_224_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5301..7202)
DNA (1902bp) protein (634aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
DNA gyrase subunit B n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A624_9FIRM
gyrB; DNA gyrase subunit B
L2_013_122G1_scaffold_224_8

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comp(7203..8318)
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7D8_9CLOT
DNA replication and repair protein RecF {ECO:0000313|EMBL:ETJ17111.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA replication and repair protein
L2_013_122G1_scaffold_224_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8339..8545)
DNA (207bp) protein (69aa)
S4 domain protein YaaA n=2 Tax=Clostridiales RepID=B0A626_9FIRM
S4 domain protein YaaA {ECO:0000313|EMBL:CDA11547.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RNA-binding mediating protein
L2_013_122G1_scaffold_224_10

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comp(8694..9809)
DNA (1116bp) protein (372aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A627_9FIRM
DNA polymerase III subunit beta {ECO:0000313|EMBL:ETJ17113.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_013_122G1_scaffold_224_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10074..11429)
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Clostridiales RepID=B0A628_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
dnaA; chromosomal replication initiator protein
L2_013_122G1_scaffold_224_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12418..12552
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Clostridiales RepID=B0A629_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpmH; 50S ribosomal protein L34
L2_013_122G1_scaffold_224_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12652..12996
DNA (345bp) protein (115aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Clostridiales RepID=B0A630_9FIRM
L2_013_122G1_scaffold_224_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13030..13281
DNA (252bp) protein (84aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridiales RepID=B0A631_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_013_122G1_scaffold_224_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13304..14068
DNA (765bp) protein (255aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A632_9FIRM
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EDQ97926.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sporulation membrane protein
L2_013_122G1_scaffold_224_16

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14052..14708
DNA (657bp) protein (219aa)
R3H domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17119.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SpoIIIJ-associated protein
L2_013_122G1_scaffold_224_17

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14877..16256
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGN9_9CLOT
tRNA modification GTPase MnmE {ECO:0000313|EMBL:ETJ17120.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
trmE; tRNA modification GTPase TrmE
L2_013_122G1_scaffold_224_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16425..18320
DNA (1896bp) protein (632aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Clostridiales RepID=B0A635_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
L2_013_122G1_scaffold_224_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18313..19032
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A636_9FIRM
gidB; 16S rRNA methyltransferase GidB
L2_013_122G1_scaffold_224_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19192..19977
DNA (786bp) protein (262aa)
ParB-like protein n=2 Tax=Clostridiales RepID=B0A637_9FIRM
ParB-like protein {ECO:0000313|EMBL:CDA11536.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
stage 0 sporulation protein
L2_013_122G1_scaffold_224_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20060..20881
DNA (822bp) protein (274aa)
ParB-like protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A638_9FIRM
ParB-like protein {ECO:0000313|EMBL:EDQ97932.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
spo0J; stage 0 sporulation protein J
L2_013_122G1_scaffold_224_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21197..22489
DNA (1293bp) protein (431aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A639_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDQ97933.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transcriptional regulator
L2_013_122G1_scaffold_224_23

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22651..22911
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A640_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17126.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_122G1_scaffold_224_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22928..23119
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A641_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97935.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_013_122G1_scaffold_224_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23298..23576
DNA (279bp) protein (93aa)
30S ribosomal protein S6 n=2 Tax=Clostridiales RepID=B0A642_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
30S ribosomal protein S6
L2_013_122G1_scaffold_224_26

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23616..24056
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridiales RepID=B0A643_9FIRM
Single-stranded DNA-binding protein {ECO:0000313|EMBL:ETJ17129.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ssb; single-strand binding protein
L2_013_122G1_scaffold_224_27

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24078..24305
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=2 Tax=Clostridiales RepID=B0A644_9FIRM
30S ribosomal protein S18 {ECO:0000313|EMBL:ETJ17130.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpsR; 30S ribosomal protein S18
L2_013_122G1_scaffold_224_28

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24641..25021
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A645_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17131.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_122G1_scaffold_224_29

Not on your lists

25014..25988
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y4H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17132.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_122G1_scaffold_224_30

Not on your lists

25999..28005
DNA (2007bp) protein (669aa)
DHHA1 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A647_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17133.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA/single-stranded DNA exonuclease
Displaying items 1-30 of 73 in total

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