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L2_013_122G1_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_234_1
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1188)
DNA (1188bp) protein (396aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EFD05220.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EFD05220.1};; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRN3_9FIRM
L2_013_122G1_scaffold_234_2
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1209..1760)
DNA (552bp) protein (184aa)
Type I restriction enzyme, S subunit n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J424_9FIRM
Type I restriction enzyme, S subunit {ECO:0000313|EMBL:EOS28818.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
restriction modification system DNA specificity domain-containing protein
L2_013_122G1_scaffold_234_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1778..3088)
DNA (1311bp) protein (437aa)
Putative type I restriction-modification system, specificity determinant n=1 Tax=Streptococcus mutans 4SM1 RepID=M2E6R2_STRMG
Uncharacterized protein {ECO:0000313|EMBL:CDD07895.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hsdS; putative type I restriction endonuclease S subunit HsdS
L2_013_122G1_scaffold_234_4
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3081..4103)
DNA (1023bp) protein (341aa)
Toxin-antitoxin system, toxin component, Fic family n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MSE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05212.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Virulence protein
L2_013_122G1_scaffold_234_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4157..4408)
DNA (252bp) protein (84aa)
restriction modification system DNA specificity domain-containing protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A48CD
type I restriction modification DNA specificity domain protein
Tax=CG_Nomura_01
L2_013_122G1_scaffold_234_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4412..6034)
DNA (1623bp) protein (541aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EFK93246.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EFK93246.1};; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
hsdM; type I restriction-modification system subunit M (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PT74_FINMA
L2_013_122G1_scaffold_234_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6034..6267)
DNA (234bp) protein (78aa)
DNA-binding helix-turn-helix protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PT75_FINMA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK93226.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
hypothetical protein
L2_013_122G1_scaffold_234_8
Staphylococcus simulans, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6590..7573)
DNA (984bp) protein (328aa)
Alkaline shock protein 23 n=1 Tax=Staphylococcus simulans ACS-120-V-Sch1 RepID=K8P188_STASI
Alkaline shock protein 23 {ECO:0000313|EMBL:ERS94198.1}; TaxID=1405498 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simulans UMC-CNS-990.;"
putative alkaline shock protein
L2_013_122G1_scaffold_234_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7630..8109)
DNA (480bp) protein (160aa)
alkaline shock protein 23 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AF31
Alkaline shock protein 23 {ECO:0000313|EMBL:EZX15820.1}; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
alkaline shock protein 23
L2_013_122G1_scaffold_234_10
unknown

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comp(8161..8535)
DNA (375bp) protein (125aa)

This feature has no annotations

L2_013_122G1_scaffold_234_11
unknown

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comp(8544..9104)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2C06
L2_013_122G1_scaffold_234_12
unknown

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9552..9695
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_122G1_scaffold_234_13
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9775..11274
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM49_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18216.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_013_122G1_scaffold_234_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11277..11927
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97184.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
nitrogen regulatory protein P-II
L2_013_122G1_scaffold_234_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11999..12199)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CMX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00036.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
L2_013_122G1_scaffold_234_16
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12223..13272)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6T7V5_9BACI
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KIY22894.1}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus.;"
mechanosensitive ion channel protein MscS
L2_013_122G1_scaffold_234_17
unknown

Not on your lists

comp(13285..13968)
DNA (684bp) protein (228aa)

This feature has no annotations

L2_013_122G1_scaffold_234_18
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(13982..15214)
DNA (1233bp) protein (411aa)
HI0933 family protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AK35_9FIRM
HI0933 family protein {ECO:0000313|EMBL:CCX39716.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L2_013_122G1_scaffold_234_19
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15223..16128)
DNA (906bp) protein (302aa)
ParB-like partition protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1E0_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EKP94774.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
parB-like partition protein
L2_013_122G1_scaffold_234_20
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16115..16876)
DNA (762bp) protein (254aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1W2_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEQ49249.1}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
cobyrinic acid ac-diamide synthase
L2_013_122G1_scaffold_234_21
unknown

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17306..17521
DNA (216bp) protein (72aa)

This feature has no annotations

L2_013_122G1_scaffold_234_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17564..17794
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Desulfotomaculum RepID=K8DWT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KDR96803.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
hypothetical protein
L2_013_122G1_scaffold_234_23
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17884..18606
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD156 RepID=J8HW55_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR72599.1}; TaxID=1053239 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD156.;"
N-acetylmuramoyl-L-alanine amidase
L2_013_122G1_scaffold_234_24
unknown

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18599..19012
DNA (414bp) protein (138aa)

This feature has no annotations

L2_013_122G1_scaffold_234_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19231..19644
DNA (414bp) protein (138aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8H1_CLOSW
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADL05700.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_122G1_scaffold_234_26
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19768..20646)
DNA (879bp) protein (293aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UD70_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERT57377.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
L2_013_122G1_scaffold_234_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20776..21510)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5U4_9FIRM
gidB; 16S rRNA methyltransferase GidB
L2_013_122G1_scaffold_234_28
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21500..23407)
DNA (1908bp) protein (636aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Desulfurispora thermophila RepID=UPI000374CFE5
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
L2_013_122G1_scaffold_234_29
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23413..24777)
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
tRNA modification GTPase MnmE n=1 Tax=Desmospora sp. 8437 RepID=F5SHE6_9BACL
trmE; tRNA modification GTPase
L2_013_122G1_scaffold_234_30
unknown

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comp(24875..25156)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

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