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L2_013_122G1_scaffold_285

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_285_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(273..2081)
DNA (1809bp) protein (603aa)
UvrABC system protein C n=10 Tax=Lactobacillus rhamnosus RepID=B5QN04_LACRH
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2286..3032)
DNA (747bp) protein (249aa)
ABC-type polar amino acid transport system, ATPase component n=10 Tax=Lactobacillus rhamnosus RepID=B5QN03_LACRH
Cell division transporter, ATP-binding protein FtsE
Cell division transporter ATP-binding protein FtsE {ECO:0000313|EMBL:EKS52527.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3022..4479)
DNA (1458bp) protein (486aa)
ABC-type amino acid transport system, permease and periplasmic component n=2 Tax=Lactobacillus rhamnosus RepID=B5QN02_LACRH
amino acid ABC transporter permease and substrate binding components
ABC transporter, amino acid transporter permease protein {ECO:0000313|EMBL:CAR87251.1}; Amino acid ABC transporter permease and substrate binding components {ECO:0000313|EMBL:BAI41827.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4719..4880
DNA (162bp) protein (54aa)
Uncharacterized protein n=12 Tax=Lactobacillus rhamnosus RepID=C7TCA7_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74046.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_285_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5009..5299)
DNA (291bp) protein (97aa)
Predicted pyrophosphatase n=13 Tax=Lactobacillus rhamnosus RepID=B5QN00_LACRH
mazG nucleotide pyrophosphohydrolase domain protein
Uncharacterized protein {ECO:0000313|EMBL:EKS52530.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5299..5898)
DNA (600bp) protein (200aa)
Probable GTP-binding protein EngB n=9 Tax=Lactobacillus rhamnosus RepID=B5QMZ9_LACRH
putative GTPase
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6085..7335)
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=9 Tax=Lactobacillus rhamnosus RepID=B5QMZ8_LACRH
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_285_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7498..8838)
DNA (1341bp) protein (447aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Trigger factor n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMZ7_LACRH
trigger factor
L2_013_122G1_scaffold_285_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9010..10863)
DNA (1854bp) protein (618aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6ALB2_LACRH
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN80415.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Lipid A export ATP-binding/permease protein MsbA
L2_013_122G1_scaffold_285_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10896..11279
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMZ5_LACRH
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AGP74040.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_285_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11342..11716
DNA (375bp) protein (125aa)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EKS52536.1}; EC=4.1.1.44 {ECO:0000313|EMBL:EKS52536.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMZ4_LACRH
hypothetical protein
L2_013_122G1_scaffold_285_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11713..12447
DNA (735bp) protein (245aa)
Silent information regulator protein Sir2 n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMZ3_LACRH
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:EEN80412.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
silent information regulator protein sir2
L2_013_122G1_scaffold_285_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12516..13382
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMZ2_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS52538.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L2_013_122G1_scaffold_285_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13924..15114)
DNA (1191bp) protein (397aa)
Elongation factor Tu n=13 Tax=Lactobacillus rhamnosus RepID=B5QMZ1_LACRH
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15335..16240)
DNA (906bp) protein (302aa)
Conserved protein (TPR repeats) n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TC93_LACRG
hypothetical protein
Conserved protein (TPR repeats) {ECO:0000313|EMBL:CAR87236.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41814.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16321..18003)
DNA (1683bp) protein (561aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TC92_LACRG
putative hydrolase
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CAR87235.1}; Putative hydrolase {ECO:0000313|EMBL:BAI41813.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18303..18992)
DNA (690bp) protein (230aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TC91_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87234.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41812.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19110..19379)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=10 Tax=Lactobacillus RepID=B5QMY7_LACRH
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19628..19882
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=13 Tax=Lactobacillus rhamnosus RepID=B5QMY6_LACRH
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19995..21056)
DNA (1062bp) protein (354aa)
DNA polymerase III, delta subunit n=7 Tax=Lactobacillus rhamnosus RepID=B5QMY5_LACRH
DNA polymerase III subunit delta
DNA polymerase III delta subunit {ECO:0000313|EMBL:AGP74028.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_285_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21043..23247)
DNA (2205bp) protein (735aa)
Predicted hydrolase (Metallo-beta-lactamase superfamily) protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QMY4_LACRH
putative hydrolase
Hydrolase (Metallo-beta-lactamase superfamily) protein {ECO:0000313|EMBL:CAR87230.1}; Putative hydrolase {ECO:0000313|EMBL:BAI41808.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23244..23909)
DNA (666bp) protein (222aa)
DNA uptake protein related DNA-binding protein n=3 Tax=Lactobacillus rhamnosus RepID=B5QMY3_LACRH
DNA uptake protein
DNA uptake protein {ECO:0000313|EMBL:BAI41807.1}; DNA uptake protein related DNA-binding protein {ECO:0000313|EMBL:CAR87229.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24007..25095)
DNA (1089bp) protein (363aa)
Protease n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C8UTV2_LACRG
protease
Protease {ECO:0000313|EMBL:BAI41806.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25073..25576)
DNA (504bp) protein (168aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Phosphopantetheine adenylyltransferase n=10 Tax=Lactobacillus rhamnosus RepID=B5QMY1_LACRH
coaD; phosphopantetheine adenylyltransferase
L2_013_122G1_scaffold_285_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25569..26135)
DNA (567bp) protein (189aa)
N6-adenine-specific methylase n=2 Tax=Lactobacillus rhamnosus RepID=B5QMY0_LACRH
methyltransferase
Methyltransferase {ECO:0000313|EMBL:BAI41804.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_285_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26122..26469)
DNA (348bp) protein (116aa)
UPF0298 protein LRH_06006 n=13 Tax=Lactobacillus rhamnosus RepID=B5QMX9_LACRH
hypothetical protein
UPF0298 protein LRHMDP2_1075 {ECO:0000256|HAMAP-Rule:MF_01126}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26487..29924)
DNA (3438bp) protein (1146aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Pyruvate carboxylase n=2 Tax=Lactobacillus rhamnosus RepID=B5QMX8_LACRH
pyruvate carboxylase
L2_013_122G1_scaffold_285_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29917..31086)
DNA (1170bp) protein (390aa)
Cell division membrane protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QMX7_LACRH
Cell division protein FtsW
Cell division protein FtsW {ECO:0000313|EMBL:EKS52554.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_285_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31333..33177)
DNA (1845bp) protein (615aa)
Stress response membrane GTPase n=10 Tax=Lactobacillus rhamnosus RepID=B5QMX6_LACRH
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:AGP74018.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
GTP-binding protein TypA/BipA
L2_013_122G1_scaffold_285_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33430..34224)
DNA (795bp) protein (265aa)
Archaeal fructose-1,6-bisphosphatase related enzyme of inositol monophosphatase family protein n=10 Tax=Lactobacillus rhamnosus RepID=B5QMX5_LACRH
inositol monophosphatase family protein
Inositol-1-monophosphatase {ECO:0000313|EMBL:AGP74016.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 50 in total

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