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L2_013_122G1_scaffold_309

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_309_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(173..1027)
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1146 Tax=Enterobacteriaceae RepID=KDSA_ECO24
L2_013_122G1_scaffold_309_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1063..1872)
DNA (810bp) protein (270aa)
Protein sirB1 n=936 Tax=Enterobacteriaceae RepID=SIRB1_ECO57
transcriptional regulator
Protein sirB1 {ECO:0000313|EMBL:EOV74316.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_013_122G1_scaffold_309_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1876..2268)
DNA (393bp) protein (131aa)
Predicted transcriptional regulator n=104 Tax=Enterobacteriaceae RepID=C8U6X5_ECO10
transcriptional regulator
Invasion transcription upregulator {ECO:0000313|EMBL:EHX32001.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_013_122G1_scaffold_309_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2265..3098)
DNA (834bp) protein (278aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Release factor glutamine methyltransferase n=258 Tax=Enterobacteriaceae RepID=PRMC_ECOLI
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase,Release factor glutamine methyltransferase,N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase,Methylase of polypeptide chain release factors,methyltransferase, HemK family,Methyltransferase small domain
L2_013_122G1_scaffold_309_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3098..4180)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1336 Tax=Enterobacteriaceae RepID=RF1_ECO24
prfA; peptide chain release factor RF-1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
L2_013_122G1_scaffold_309_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4222..5478)
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
Glutamyl-tRNA reductase n=277 Tax=Enterobacteriaceae RepID=HEM1_ECO24
L2_013_122G1_scaffold_309_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5692..6315
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=903 Tax=Enterobacteriaceae RepID=LOLB_ECO24
outer membrane lipoprotein LolB
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L2_013_122G1_scaffold_309_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6315..7166
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=68 Tax=Escherichia coli RepID=C8U6X0_ECO10
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_013_122G1_scaffold_309_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7251..8264
DNA (1014bp) protein (338aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
Ribose-phosphate pyrophosphokinase n=797 Tax=Enterobacteriaceae RepID=A1AAD4_ECOK1
prs; phosphoribosylpyrophosphate synthase
L2_013_122G1_scaffold_309_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8416..10068
DNA (1653bp) protein (551aa)
Sulfate permease SulP n=77 Tax=Enterobacteriaceae RepID=F4M3S6_ECOLX
putative sulfate transporter YchM
Transporter {ECO:0000313|EMBL:EZE31197.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L2_013_122G1_scaffold_309_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10123..10401)
DNA (279bp) protein (93aa)
Uncharacterized protein YchH n=1385 Tax=Enterobacteriaceae RepID=YCHH_ECO57
ychH; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR02599.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L2_013_122G1_scaffold_309_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10679..11263
DNA (585bp) protein (195aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Peptidyl-tRNA hydrolase n=1174 Tax=Enterobacteriaceae RepID=PTH_ECO24
L2_013_122G1_scaffold_309_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11380..12471
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=977 Tax=Bacteria RepID=YCHF_ECO57
ychF; GTP-dependent nucleic acid-binding protein engD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_013_122G1_scaffold_309_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12764..12967)
DNA (204bp) protein (68aa)
Uncharacterized protein n=149 Tax=Enterobacteriaceae RepID=J7R069_ECOLX
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:END54324.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L2_013_122G1_scaffold_309_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13312..16197
DNA (2886bp) protein (962aa)
Outer membrane autotransporter barrel domain protein n=4 Tax=Escherichia coli RepID=E1IMV3_ECOLX
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EFO59457.1}; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
putative autotransporter
L2_013_122G1_scaffold_309_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16297..18216)
DNA (1920bp) protein (640aa)
Transcriptional activator for dhaKLM operon n=21 Tax=Escherichia coli RepID=D6HVS1_ECOLX
Transcriptional activator for dhaKLM operon {ECO:0000313|EMBL:EFE63758.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
DNA-binding transcriptional regulator DhaR
L2_013_122G1_scaffold_309_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18444..19514
DNA (1071bp) protein (357aa)
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:KDU26640.1}; EC=2.7.1.- {ECO:0000313|EMBL:KDU26640.1};; TaxID=1444251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C2.;"
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Escherichia coli 0.1288 RepID=K3UJE3_ECOLX
dhaK; dihydroxyacetone kinase subunit DhaK
L2_013_122G1_scaffold_309_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19525..20157
DNA (633bp) protein (211aa)
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EIH47391.1}; EC=2.7.-.- {ECO:0000313|EMBL:EIH47391.1};; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
Dihydroxyacetone kinase subunit DhaL n=2 Tax=Escherichia coli RepID=I4TTY2_ECOLX
dhaL; dihydroxyacetone kinase C-terminal domain containing protein
L2_013_122G1_scaffold_309_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20168..21586
DNA (1419bp) protein (473aa)
Fused dihydroxyacetone-specific PTS enzymes: HPr component EI component n=99 Tax=Escherichia coli RepID=B7LGV8_ECO55
dhaM; dihydroxyacetone kinase subunit DhaM
Dihydroxyacetone kinase {ECO:0000313|EMBL:KDV64950.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L2_013_122G1_scaffold_309_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21906..23603
DNA (1698bp) protein (566aa)
treA; trehalase (EC:3.2.1.28)
Trehalase {ECO:0000313|EMBL:AFH10920.1}; EC=3.2.1.28 {ECO:0000313|EMBL:AFH10920.1};; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
Periplasmic trehalase n=129 Tax=Escherichia coli RepID=TREA_ECOSE
L2_013_122G1_scaffold_309_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23682..24122)
DNA (441bp) protein (147aa)
Uncharacterized protein YcgY n=207 Tax=Enterobacteriaceae RepID=YCGY_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO26722.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L2_013_122G1_scaffold_309_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24300..24554)
DNA (255bp) protein (85aa)
Uncharacterized protein n=293 Tax=Enterobacteriaceae RepID=J7QQ59_ECOLX
ymgE; putative inner membrane protein
Transglycosylase {ECO:0000313|EMBL:EOV63693.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_013_122G1_scaffold_309_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24755..25489
DNA (735bp) protein (245aa)
Flagellar brake protein YcgR n=289 Tax=Enterobacteriaceae RepID=J7R3P2_ECOLX
flagellar brake protein YcgR
Flagellar brake protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_013_122G1_scaffold_309_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25491..26102)
DNA (612bp) protein (204aa)
Endo-type membrane-bound lytic murein transglycosylase A {ECO:0000256|HAMAP-Rule:MF_01381}; EC=4.2.2.n2 {ECO:0000256|HAMAP-Rule:MF_01381};; Peptidoglycan lytic endotransglycosylase {ECO:0000256|HAMAP-Rule:MF_01381}; Flags: Precursor;; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Endo-type membrane-bound lytic murein transglycosylase A n=622 Tax=Enterobacteriaceae RepID=EMTA_ECO55
emtA; lytic murein endotransglycosylase E
L2_013_122G1_scaffold_309_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26202..27116
DNA (915bp) protein (305aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:EFK47407.1}; EC=3.4.17.13 {ECO:0000313|EMBL:EFK47407.1};; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Uncharacterized protein n=162 Tax=Enterobacteriaceae RepID=J7R060_ECOLX
ldcA; L,D-carboxypeptidase A
L2_013_122G1_scaffold_309_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27211..28947
DNA (1737bp) protein (579aa)
K(+)/H(+) antiporter NhaP2 n=1094 Tax=Enterobacteriaceae RepID=NHAP2_ECO24
cvrA; cell volume regulation protein A
K(+)/H(+) antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075, ECO:0000256|SAAS:SAAS00010739}; Potassium/proton antiporter NhaP2 {ECO:0000256|HAMAP-Rule:MF_01075}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_013_122G1_scaffold_309_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29081..29230)
DNA (150bp) protein (50aa)
Uncharacterized protein n=136 Tax=Enterobacteriaceae RepID=E8YDD5_ECOKO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEK04412.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L2_013_122G1_scaffold_309_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29333..30403)
DNA (1071bp) protein (357aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
dadX; alanine racemase (EC:5.1.1.1)
Alanine racemase n=44 Tax=Escherichia coli RepID=B3HHP3_ECOLX
L2_013_122G1_scaffold_309_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30413..31711)
DNA (1299bp) protein (433aa)
D-amino acid dehydrogenase small subunit (EC:1.4.99.1)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
D-amino acid dehydrogenase small subunit n=765 Tax=Enterobacteriaceae RepID=DADA_ECO24
L2_013_122G1_scaffold_309_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32041..33573
DNA (1533bp) protein (511aa)
Uncharacterized protein YcgB n=494 Tax=Enterobacteriaceae RepID=YCGB_ECOLI
SpoVR family protein
Sporulation protein SpoVR {ECO:0000313|EMBL:ELE02200.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Displaying items 1-30 of 54 in total

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