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L2_013_122G1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_348_1
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(195..1343)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FCW8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI88977.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
pknB; transmembrane serine/threonine-protein kinase B
L2_013_122G1_scaffold_348_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1412..2089)
DNA (678bp) protein (226aa)
TIGR00266 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSJ8_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:EDN00954.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
conserved hypothetical protein TIGR00266
L2_013_122G1_scaffold_348_3
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2596..2988
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FE02_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEP21183.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A
L2_013_122G1_scaffold_348_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3049..3804)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATG3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI96979.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_013_122G1_scaffold_348_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3941..5266)
DNA (1326bp) protein (442aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATG2_BIFLN
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI96978.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_013_122G1_scaffold_348_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5313..6323)
DNA (1011bp) protein (337aa)
Esterase/lipase-like protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATG1_BIFLN
Esterase/lipase-like protein
Esterase/lipase-like protein {ECO:0000313|EMBL:AEI96977.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_013_122G1_scaffold_348_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6487..6696)
DNA (210bp) protein (70aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EDN82224.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN82224.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A909_BIFAD
cas3; putative CRISPR-associated helicase
L2_013_122G1_scaffold_348_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6986..7735)
DNA (750bp) protein (250aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EDN82224.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDN82224.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A909_BIFAD
cas3; putative CRISPR-associated helicase
L2_013_122G1_scaffold_348_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7756..8412)
DNA (657bp) protein (219aa)
Predicted CRISPR-associated helicase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2N4_BIFAA
cas3; putative CRISPR-associated helicase
Predicted CRISPR-associated helicase {ECO:0000313|EMBL:BAF39967.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_348_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8637..11969)
DNA (3333bp) protein (1111aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Bifidobacterium adolescentis RepID=A7A911_BIFAD
L2_013_122G1_scaffold_348_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12358..13830)
DNA (1473bp) protein (491aa)
Galactoside symporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2N6_BIFAA
lacS; galactoside symporter
Galactoside symporter {ECO:0000313|EMBL:BAF39969.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_122G1_scaffold_348_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14100..15209)
DNA (1110bp) protein (370aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium RepID=A7A914_BIFAD
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDN82229.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
LacI-type transcriptional regulator
L2_013_122G1_scaffold_348_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15273..15467
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A915_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82230.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L2_013_122G1_scaffold_348_14
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15868..16566
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H4K1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI90199.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
hypothetical protein
L2_013_122G1_scaffold_348_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16920..18998)
DNA (2079bp) protein (693aa)
ABC transporter {ECO:0000313|EMBL:KFI97240.1}; EC=3.6.3.42 {ECO:0000313|EMBL:KFI97240.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A917_BIFAD
ABC transporter
L2_013_122G1_scaffold_348_16
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19013..20833)
DNA (1821bp) protein (607aa)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSU2_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY20273.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ATP-binding protein of ABC transporter
L2_013_122G1_scaffold_348_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20834..21511)
DNA (678bp) protein (226aa)
Transcriptional regulator, MarR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A919_BIFAD
MarR-type transcriptional regulator {ECO:0000313|EMBL:KFI97242.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
MarR-type transcriptional regulator
L2_013_122G1_scaffold_348_18
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21739..23994)
DNA (2256bp) protein (752aa)
Putative beta-glucosidase {ECO:0000313|EMBL:KFI97243.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI97243.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GWV3_9BIFI
putative beta-glucosidase
L2_013_122G1_scaffold_348_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24227..24805
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A921_BIFAD
putative TetR-type transcriptional regulator
Putative TetR-type transcriptional regulator {ECO:0000313|EMBL:AJE06340.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_348_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24808..26007
DNA (1200bp) protein (400aa)
Glycerate kinase {ECO:0000313|EMBL:EDN82237.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EDN82237.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glycerate kinase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A922_BIFAD
glycerate kinase
L2_013_122G1_scaffold_348_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26277..27731)
DNA (1455bp) protein (485aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A924_BIFAD
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EDN82239.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Permeases of the major facilitator superfamily
L2_013_122G1_scaffold_348_22
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27802..28380)
DNA (579bp) protein (193aa)
Transcriptional regulator, MarR family n=2 Tax=Bifidobacterium RepID=A7A925_BIFAD
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCY20262.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Transcriptional regulator
L2_013_122G1_scaffold_348_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28564..29295)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS63_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20260.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
lacS; galactoside symporter
L2_013_122G1_scaffold_348_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29308..30648
DNA (1341bp) protein (447aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A927_BIFAD
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN82241.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L2_013_122G1_scaffold_348_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31137..33467
DNA (2331bp) protein (777aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H650_9BIFI
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:CCY20256.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
beta-D-glucosideglucohydrolase
L2_013_122G1_scaffold_348_26
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33599..34234)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A933_BIFAD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFI90212.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
TetR-type transcriptional regulator
L2_013_122G1_scaffold_348_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34245..35537)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GV64_9BIFI
beta-1,3-exoglucanase
Beta-1,3-exoglucanase {ECO:0000313|EMBL:AII76759.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_348_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35704..35940)
DNA (237bp) protein (79aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium RepID=B6XT42_9BIFI
xylan beta-1,4-xylosidase
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEG71170.1}; Putative beta-xylosidase {ECO:0000313|EMBL:BAR04060.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_013_122G1_scaffold_348_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35889..37097)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XT41_9BIFI
putative beta-1,3-exoglucanase
Putative beta-1,3-exoglucanase {ECO:0000313|EMBL:AJE06352.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_122G1_scaffold_348_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37377..38723)
DNA (1347bp) protein (449aa)
O-Glycosyl hydrolase family 30 n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A941_BIFAD
beta-D-xylosidase
Beta-D-xylosidase {ECO:0000313|EMBL:AII76761.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 50 in total

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