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L2_013_122G1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_378_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(97..660)
DNA (564bp) protein (188aa)
Glycerol uptake operon antiterminator n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QLL3_LACRH
Glycerol uptake operon antiterminator regulatory protein
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_122G1_scaffold_378_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(720..1517)
DNA (798bp) protein (266aa)
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EEN79042.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EEN79042.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Aldolase, DeoC/FbaB family protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QLL4_LACRH
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
L2_013_122G1_scaffold_378_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1728..2468)
DNA (741bp) protein (247aa)
Transcriptional regulator n=3 Tax=Lactobacillus rhamnosus RepID=B5QLL5_LACRH
Transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC97102.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_378_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2510..3007)
DNA (498bp) protein (166aa)
Acetyltransferase, GNAT family protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QLL6_LACRH
Acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEN79040.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_122G1_scaffold_378_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3023..4429)
DNA (1407bp) protein (469aa)
C4-dicarboxylate transporter n=4 Tax=Lactobacillus rhamnosus RepID=B5QLL7_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73084.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4441..5376)
DNA (936bp) protein (312aa)
Inosine-uridine nucleoside N-ribohydrolase n=4 Tax=Lactobacillus rhamnosus RepID=B5QLL8_LACRH
Inosine-uridine preferring nucleoside hydrolase
Ribonucleoside hydrolase {ECO:0000313|EMBL:KIC97099.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_378_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5833..6468)
DNA (636bp) protein (212aa)
Predicted kinase n=4 Tax=Lactobacillus rhamnosus RepID=B5QLM0_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73081.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6487..7347)
DNA (861bp) protein (287aa)
Fructose/tagatose bisphosphate aldolase n=4 Tax=Lactobacillus rhamnosus RepID=B5QLM1_LACRH
Fructose-bisphosphate aldolase class II
Fructose-bisphosphate aldolase class II {ECO:0000313|EMBL:AGP73080.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7369..7791)
DNA (423bp) protein (141aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S4ZRU4_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGF47909.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
L2_013_122G1_scaffold_378_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7808..9094)
DNA (1287bp) protein (429aa)
Ascorbate-specific PTS system enzyme IIC n=10 Tax=Lactobacillus rhamnosus RepID=B5QLM3_LACRH
PTS system sugar-specific permease component family protein
Putative integral membrane protein {ECO:0000313|EMBL:AGP73078.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9128..9439)
DNA (312bp) protein (104aa)
Phosphotransferase system, galactitol-specific IIB component n=10 Tax=Lactobacillus rhamnosus RepID=B5QLM4_LACRH
PTS system, Lactose/Cellobiose specific IIB subunit
PTS sysytem, mannitol-specific enzyme II B component {ECO:0000313|EMBL:AGP73077.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9440..11536)
DNA (2097bp) protein (699aa)
Transcriptional antiterminator and PTS system component IIA n=4 Tax=Lactobacillus rhamnosus RepID=B5QLM5_LACRH
Transcriptional antiterminator and PTS system component IIA
Transcriptional antiterminator and PTS system component IIA {ECO:0000313|EMBL:AGP73076.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11936..12196)
DNA (261bp) protein (87aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S4ZZ38_LACRH
Hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86285.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40903.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12368..12583)
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7T9J1_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI40902.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12762..13322)
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S4ZUJ1_LACRH
Hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86283.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI40901.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13319..13753)
DNA (435bp) protein (145aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=B5QLN1_LACRH
Transcriptional regulator, MarR family
Transcriptional regulator {ECO:0000313|EMBL:BAI40900.1}; Transcriptional regulator, MarR family {ECO:0000313|EMBL:CAR86282.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13729..15117)
DNA (1389bp) protein (463aa)
Permease of the major facilitator superfamily protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QLN2_LACRH
Permease of the major facilitator superfamily
Putative transporter protein {ECO:0000313|EMBL:BAI40899.1}; Transporter, major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CAR86281.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15751..16536
DNA (786bp) protein (262aa)
Conserved membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TG85_LACRL
membrane protein
Membrane protein {ECO:0000313|EMBL:KIC97089.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_378_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16526..17206
DNA (681bp) protein (227aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S4ZRT4_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS53848.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L2_013_122G1_scaffold_378_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17203..17925
DNA (723bp) protein (241aa)
Rhodopsin-like GPCR superfamily n=5 Tax=Lactobacillus rhamnosus RepID=C7TG83_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79023.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_122G1_scaffold_378_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17937..18572
DNA (636bp) protein (212aa)
ABC transporter, ATP-binding protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QLN6_LACRH
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGP73067.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18562..19086
DNA (525bp) protein (175aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S4ZT49_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73066.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19233..21221
DNA (1989bp) protein (663aa)
Cell division protein FtsI/penicillin-binding protein 2 n=5 Tax=Lactobacillus rhamnosus RepID=B5QLN8_LACRH
Cell division protein FtsI (Peptidoglycan synthetase)
Putative cell division protein {ECO:0000313|EMBL:BAI40895.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21259..21558
DNA (300bp) protein (100aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=G6IXS4_LACRH
Putative transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC96664.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L2_013_122G1_scaffold_378_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21664..22605)
DNA (942bp) protein (314aa)
Sugar kinase, ribokinase family protein n=4 Tax=Lactobacillus rhamnosus RepID=B5QLP0_LACRH
Ribokinase
Ribokinase {ECO:0000313|EMBL:BAI40889.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L2_013_122G1_scaffold_378_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22704..23663)
DNA (960bp) protein (320aa)
ABC-type sugar transport system, periplasmic component n=4 Tax=Lactobacillus rhamnosus RepID=B5QLP1_LACRH
ribose ABC transporter (ribose-binding protein)
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:AGP73058.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L2_013_122G1_scaffold_378_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23760..24740)
DNA (981bp) protein (327aa)
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component n=10 Tax=Lactobacillus rhamnosus RepID=B5QLP2_LACRH
Ribose ABC transport system, permease protein RbsC
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEN79267.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L2_013_122G1_scaffold_378_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24724..26298)
DNA (1575bp) protein (525aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC-type sugar transport system, ATPase component n=4 Tax=Lactobacillus rhamnosus RepID=B5QLP3_LACRH
Ribose ABC transport system, ATP-binding protein RbsA
L2_013_122G1_scaffold_378_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26515..26907)
DNA (393bp) protein (131aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
D-ribose pyranase n=12 Tax=Lactobacillus rhamnosus RepID=B5QLP4_LACRH
Ribose ABC transport system, high affinity permease RbsD
L2_013_122G1_scaffold_378_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26941..27960)
DNA (1020bp) protein (340aa)
Ribose operon repressor n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QLP5_LACRH
rbsR; transcriptional regulator LacI family
LacI family transcriptional regulator {ECO:0000313|EMBL:KIC96680.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 45 in total

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