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L2_013_122G1_scaffold_442

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_442_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84166.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
aldo/keto reductase family oxidoreductase
L2_013_122G1_scaffold_442_2
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(268..840)
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TP33_ALKMQ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABR47951.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L2_013_122G1_scaffold_442_3
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(862..1677)
DNA (816bp) protein (272aa)
Cof-like hydrolase n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AM09_SEBTE
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ACZ07277.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_013_122G1_scaffold_442_4
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1750..2319)
DNA (570bp) protein (190aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.79 2.3.1.18)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KK89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46815.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_013_122G1_scaffold_442_5
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2400..3317)
DNA (918bp) protein (306aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:149 RepID=R5MDQ3_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY83217.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
transcriptional regulator, AraC family
L2_013_122G1_scaffold_442_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3458..5200)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8S051_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14192.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
multidrug ABC transporter ATPase and permease
L2_013_122G1_scaffold_442_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5201..7003)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8S053_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52769.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
multidrug ABC transporter ATPase and permease
L2_013_122G1_scaffold_442_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7213..7830)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VT00_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDO61296.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator, TetR family
L2_013_122G1_scaffold_442_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8066..9295
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07744.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
alcohol dehydrogenase
L2_013_122G1_scaffold_442_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9312..10691
DNA (1380bp) protein (460aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Dorea sp. 5-2 RepID=R9NBR0_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_013_122G1_scaffold_442_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10761..11606)
DNA (846bp) protein (282aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4D4_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerases 2
L2_013_122G1_scaffold_442_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11771..12043)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SJ98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46687.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_442_13
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12049..12504)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XYN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57348.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Protein of unknown function (DUF1653).
L2_013_122G1_scaffold_442_14
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12522..12947)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604103
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97929.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
L2_013_122G1_scaffold_442_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

13112..14056
DNA (945bp) protein (315aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1G0_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:CCZ32589.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_013_122G1_scaffold_442_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14118..15257
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74403.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_013_122G1_scaffold_442_17
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15275..16375)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BXD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60310.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
putative Xre family DNA-binding protein
L2_013_122G1_scaffold_442_18
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16646..17386)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BSC0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48793.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
metallophosphoesterase
L2_013_122G1_scaffold_442_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17489..18112
DNA (624bp) protein (208aa)
Alpha/beta hydrolase fold n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3F0_9FIRM
alpha/beta hydrolase fold.
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBK98043.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_013_122G1_scaffold_442_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18093..18689)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35549.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_122G1_scaffold_442_21
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18700..19185)
DNA (486bp) protein (162aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
ligT; 2'-5' RNA ligase (EC:6.5.1.-)
2'-5' RNA ligase LigT n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RXU8_BUTPB
L2_013_122G1_scaffold_442_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19204..20073)
DNA (870bp) protein (290aa)
pyruvate formate lyase activator (EC:1.97.1.4)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036D8101
Pyruvate formate lyase activating enzyme {ECO:0000313|EMBL:EGN40123.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_013_122G1_scaffold_442_23
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20070..21458)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J5N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29504.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
extradiol ring-cleavage dioxygenase, class III protein, subunit B
L2_013_122G1_scaffold_442_24
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21643..22290
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Enterococcus faecium RepID=L2PI04_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT51227.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
hypothetical protein
L2_013_122G1_scaffold_442_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22475..23425
DNA (951bp) protein (317aa)
ABC transporter family protein n=1 Tax=Clostridium difficile P29 RepID=T4P599_CLODI
Daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ELB40598.1}; TaxID=1138915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0024.;"
ABC transporter
L2_013_122G1_scaffold_442_26
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23415..24188
DNA (774bp) protein (258aa)
ABC-2 type transporter family protein n=1 Tax=Clostridium difficile P29 RepID=T4P5R0_CLODI
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1138915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0024.;"
hypothetical protein
L2_013_122G1_scaffold_442_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24272..25441)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003782FAA
Multidrug transporter MatE {ECO:0000313|EMBL:KHD14703.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Na+ driven multidrug efflux pump
L2_013_122G1_scaffold_442_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25438..25626)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98645.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Na+ driven multidrug efflux pump
L2_013_122G1_scaffold_442_29
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25619..26239)
DNA (621bp) protein (207aa)
galactoside O-acetyltransferase (EC:2.3.1.18)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JN80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35685.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_013_122G1_scaffold_442_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26713..26994
DNA (282bp) protein (94aa)
Helix-turn-helix domain protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4F6_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCY98643.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
AraC family transcriptional regulator
Displaying items 1-30 of 44 in total

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