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L2_013_122G1_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_474_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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236..1090
DNA (855bp) protein (285aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9XGR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58897.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_013_122G1_scaffold_474_2
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1103..1657)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003765266
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW35895.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
L2_013_122G1_scaffold_474_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1703..4246)
DNA (2544bp) protein (848aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037B0A08
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EET60685.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative beta-mannosidase
L2_013_122G1_scaffold_474_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4291..5127)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00035FEAFB
ABC transporter, permease protein {ECO:0000313|EMBL:EET60686.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter permease
L2_013_122G1_scaffold_474_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5127..6014)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003729CF3
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ85003.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_013_122G1_scaffold_474_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6076..7416)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037B8E99
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET60688.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
sugar ABC transporter periplasmic protein
L2_013_122G1_scaffold_474_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7681..9417
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037A1E39
putative signal transduction protein with a C-terminal ATPase domain
Putative signal transduction protein with a C-terminal ATPase domain {ECO:0000313|EMBL:CDZ23794.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L2_013_122G1_scaffold_474_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9423..10925
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000376736F
Uncharacterized protein {ECO:0000313|EMBL:EPR13757.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_013_122G1_scaffold_474_9
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11067..12296)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E9Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99066.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L2_013_122G1_scaffold_474_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12283..15525)
DNA (3243bp) protein (1081aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I4E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31877.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
M protein-like MukB domain-containing protein
L2_013_122G1_scaffold_474_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15479..16108)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQ49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31878.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_013_122G1_scaffold_474_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16111..17487)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31879.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_013_122G1_scaffold_474_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17726..19507)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8C2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14066.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_013_122G1_scaffold_474_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19766..21460)
DNA (1695bp) protein (565aa)
Glycosyl transferase, group 1 family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4N0_ACIC5
glycosyl transferase family protein
Glycosyl transferase, group 1 family {ECO:0000313|EMBL:ACO32956.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
L2_013_122G1_scaffold_474_15
unknown

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comp(21457..21696)
DNA (240bp) protein (80aa)

This feature has no annotations

L2_013_122G1_scaffold_474_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21696..23060)
DNA (1365bp) protein (455aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HPR6_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:CCY31720.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_013_122G1_scaffold_474_17
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(23072..23608)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000381CFCE
GNAT family acetyltransferase {ECO:0000313|EMBL:KKT59014.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
acetyltransferase, ribosomal protein N-acetylase
L2_013_122G1_scaffold_474_18
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23609..24577)
DNA (969bp) protein (323aa)
Peptidase U32 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJH9_CELLD
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ADZ85574.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_013_122G1_scaffold_474_19
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24574..25398)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJI0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85575.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_013_122G1_scaffold_474_20
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25401..26411)
DNA (1011bp) protein (337aa)
Radical SAM domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JLA4_CELLD
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADZ85749.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_013_122G1_scaffold_474_21
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26491..26784)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KHJ39671.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
L2_013_122G1_scaffold_474_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26789..27781)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEL5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74531.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_013_122G1_scaffold_474_23
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27778..29145)
DNA (1368bp) protein (456aa)
Transcriptional regulatory protein n=1 Tax=Blautia sp. CAG:257 RepID=R5X8Y2_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:CDA04831.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
transcriptional regulatory protein
L2_013_122G1_scaffold_474_24
unknown

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comp(29145..29426)
DNA (282bp) protein (94aa)

This feature has no annotations

L2_013_122G1_scaffold_474_25
unknown

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comp(29426..31024)
DNA (1599bp) protein (533aa)

This feature has no annotations

L2_013_122G1_scaffold_474_26
unknown

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comp(31120..31761)
DNA (642bp) protein (214aa)

This feature has no annotations

L2_013_122G1_scaffold_474_27
unknown

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comp(31772..32497)
DNA (726bp) protein (242aa)

This feature has no annotations

L2_013_122G1_scaffold_474_28
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32593..34026)
DNA (1434bp) protein (478aa)
Uncharacterized protein {ECO:0000313|EMBL:ETP71862.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
L2_013_122G1_scaffold_474_29
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34068..34358)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36742.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_013_122G1_scaffold_474_30
unknown

Not on your lists

comp(34391..34726)
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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