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L2_013_122G1_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_486_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2..259
DNA (258bp) protein (86aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAB8_9FIRM
L2_013_122G1_scaffold_486_2
unknown

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277..468
DNA (192bp) protein (64aa)

This feature has no annotations

L2_013_122G1_scaffold_486_3
unknown

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465..668
DNA (204bp) protein (68aa)

This feature has no annotations

L2_013_122G1_scaffold_486_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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693..2504
DNA (1812bp) protein (604aa)
Aspartate--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGF7_9FIRM
Aspartate-tRNA ligase {ECO:0000313|EMBL:EGJ45761.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
aspartyl-tRNA synthetase
L2_013_122G1_scaffold_486_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2583..4541
DNA (1959bp) protein (653aa)
Arylsulfatase {ECO:0000313|EMBL:EDM99368.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDM99368.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Arylsulfatase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX20_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_013_122G1_scaffold_486_6
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4623..5015
DNA (393bp) protein (131aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TRB5_9FIRM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDC72354.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_013_122G1_scaffold_486_7
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5074..6543)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Brevibacillus laterosporus RepID=UPI000369D71C
Uncharacterized protein {ECO:0000313|EMBL:AKF95621.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
hypothetical protein
L2_013_122G1_scaffold_486_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6703..8673)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38439.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
thiamine pyrophosphate protein, central region
L2_013_122G1_scaffold_486_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8917..9723)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38438.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
iolB; myo-inositol catabolism protein
L2_013_122G1_scaffold_486_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10050..10931
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38437.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
AraC family transcriptional regulator
L2_013_122G1_scaffold_486_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10995..11750)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38436.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
iolR; HTH-type transcriptional regulator IolR
L2_013_122G1_scaffold_486_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12268..13119
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38435.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transketolase, beta subunit
L2_013_122G1_scaffold_486_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13134..14099
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W170_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38434.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Transketolase domain protein
L2_013_122G1_scaffold_486_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14148..15044)
DNA (897bp) protein (299aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (EC:2.7.3.-)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QS49_9FIRM
L2_013_122G1_scaffold_486_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15041..15712)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47683.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
regulatory protein vanR
L2_013_122G1_scaffold_486_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15990..18122)
DNA (2133bp) protein (711aa)
Efflux ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2QKK7_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERK56754.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative ABC transporter permease protein
L2_013_122G1_scaffold_486_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(18402..19145)
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMA4_9FIRM
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY25897.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative ABC transporter ATP-binding protein
L2_013_122G1_scaffold_486_18
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19685..20446)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M877_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67043.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
conjugal transfer protein TraX
L2_013_122G1_scaffold_486_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20654..21361
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MGS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67042.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative two-component response regulator
L2_013_122G1_scaffold_486_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21375..22643
DNA (1269bp) protein (423aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QKL1_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK56759.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative two-component histidine kinase
L2_013_122G1_scaffold_486_21
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22686..22946)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K665_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71739.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L2_013_122G1_scaffold_486_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22976..23680)
DNA (705bp) protein (235aa)
HAD hydrolase, family IA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W502_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:EOQ39975.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
haloacid dehalogenase superfamily enzyme, subfamily IA
L2_013_122G1_scaffold_486_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23688..24248)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B61319
UPF0340 protein BN542_00656 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
conserved hypothetical protein TIGR01440
L2_013_122G1_scaffold_486_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24375..24572
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WA01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39957.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_122G1_scaffold_486_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24569..24826
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12267.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_013_122G1_scaffold_486_26
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24826..25278
DNA (453bp) protein (151aa)
Mn-containing catalase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5L0_9FIRM
Mn-containing catalase {ECO:0000313|EMBL:CDD02004.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
manganese containing catalase
L2_013_122G1_scaffold_486_27
unknown

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comp(25431..25709)
DNA (279bp) protein (93aa)

This feature has no annotations

L2_013_122G1_scaffold_486_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(25930..26814)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R239_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42933.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
LysR family transcriptional regulator
L2_013_122G1_scaffold_486_29
unknown

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26880..27104
DNA (225bp) protein (75aa)

This feature has no annotations

L2_013_122G1_scaffold_486_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27101..27754
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 PF67_9FIRM">RepID=B0PF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10000.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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