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L2_013_122G1_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_501_1
unknown

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3..152
DNA (150bp) protein (50aa)

This feature has no annotations

L2_013_122G1_scaffold_501_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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285..1877
DNA (1593bp) protein (531aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GB60_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CCY14403.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_501_3
unknown

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2029..2262
DNA (234bp) protein (78aa)

This feature has no annotations

L2_013_122G1_scaffold_501_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2547..3272
DNA (726bp) protein (242aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK59_9FIRM
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CCY12936.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_501_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3303..3728
DNA (426bp) protein (142aa)
PF13274 family protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FU73_9CLOT
PF13274 family protein {ECO:0000313|EMBL:CCY08625.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Phage protein
L2_013_122G1_scaffold_501_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3785..4747
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FYD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY08624.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L2_013_122G1_scaffold_501_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4787..5869)
DNA (1083bp) protein (361aa)
CbiG n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJD6_9FIRM
CbiG {ECO:0000313|EMBL:CCY12937.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cobalamin (vitamin B12) biosynthesis protein CbiG
L2_013_122G1_scaffold_501_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5881..6780)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTF4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN00717.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
LysR family transcriptional regulator
L2_013_122G1_scaffold_501_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7317..8591
DNA (1275bp) protein (425aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6Y6_9FIRM
L2_013_122G1_scaffold_501_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8848..9600
DNA (753bp) protein (251aa)
Precorrin-4 C(11)-methyltransferase n=3 Tax=Eubacterium RepID=C0ERL8_9FIRM
Precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:CCY12917.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
precorrin-4 C(11)-methyltransferase
L2_013_122G1_scaffold_501_11
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9603..10781
DNA (1179bp) protein (393aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERL7_9FIRM
L2_013_122G1_scaffold_501_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10929..11684
DNA (756bp) protein (252aa)
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EEG38090.1}; EC=2.1.1.131 {ECO:0000313|EMBL:EEG38090.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Precorrin-3B C(17)-methyltransferase n=2 Tax=Eubacterium RepID=C0ERL6_9FIRM
Cobalt-precorrin-3b C17-methyltransferase
L2_013_122G1_scaffold_501_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11763..14258
DNA (2496bp) protein (832aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Hydroxymethylbilane synthase n=2 Tax=Eubacterium RepID=C0ERL5_9FIRM
porphobilinogen deaminase
L2_013_122G1_scaffold_501_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14255..15034
DNA (780bp) protein (260aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Cobalamin synthase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6Y1_9FIRM
cobalamin 5'-phosphate synthase
L2_013_122G1_scaffold_501_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15152..16261
DNA (1110bp) protein (370aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJA5_9FIRM
L2_013_122G1_scaffold_501_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16320..16958
DNA (639bp) protein (213aa)
Precorrin-8X methylmutase n=2 Tax=Eubacterium RepID=C0ERL2_9FIRM
Precorrin-8X methylmutase {ECO:0000313|EMBL:CDB18564.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Cobalt-precorrin-8x methylmutase
L2_013_122G1_scaffold_501_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16955..18064
DNA (1110bp) protein (370aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERL1_9FIRM
cobalamin biosynthesis protein CbiD
L2_013_122G1_scaffold_501_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18124..19371
DNA (1248bp) protein (416aa)
Precorrin-6Y C5 15-methyltransferase (Decarboxylating) CbiT subunit n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAH6_9FIRM
Precorrin-6Y C5 15-methyltransferase (Decarboxylating) CbiT subunit {ECO:0000313|EMBL:CCY12909.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
precorrin-6y C5,15-methyltransferase subunit CbiE
L2_013_122G1_scaffold_501_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19408..20190
DNA (783bp) protein (261aa)
Cobalt chelatase (CbiK) n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6X3_9FIRM
Cobalt chelatase (CbiK) {ECO:0000313|EMBL:CCY12908.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
anaerobic cobalt chelatase
L2_013_122G1_scaffold_501_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20200..20895
DNA (696bp) protein (232aa)
Cobalt-precorrin-2 C20-methyltransferase (EC:2.1.1.130)
Precorrin-2 C(20)-methyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJ99_9FIRM
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:CCY12907.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_501_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20954..21661
DNA (708bp) protein (236aa)
Precorrin-6A reductase {ECO:0000313|EMBL:EEG38081.1}; EC=1.3.1.54 {ECO:0000313|EMBL:EEG38081.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Precorrin-6A reductase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERK7_9FIRM
precorrin-6x reductase
L2_013_122G1_scaffold_501_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21787..23286
DNA (1500bp) protein (500aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
cobyrinic acid a,c-diamide synthase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B4D4D6
L2_013_122G1_scaffold_501_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..24495
DNA (1026bp) protein (342aa)
Cobalamin biosynthesis protein CobD n=2 Tax=Eubacterium RepID=C0ERM5_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
cobalamin biosynthesis protein CobD
L2_013_122G1_scaffold_501_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24650..25831
DNA (1182bp) protein (394aa)
Putative threonine-phosphate decarboxylase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GX14_9FIRM
Putative threonine-phosphate decarboxylase {ECO:0000313|EMBL:CDB18572.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
class I and II aminotransferase
L2_013_122G1_scaffold_501_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25779..27911
DNA (2133bp) protein (711aa)
Cobyric acid synthase n=2 Tax=Eubacterium RepID=C0ERM8_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cobyric acid synthase CobQ
L2_013_122G1_scaffold_501_26
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28105..28893
DNA (789bp) protein (263aa)
Siroheme synthase domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAI5_9FIRM
Siroheme synthase domain protein {ECO:0000313|EMBL:CDB18574.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
uroporphyrin-III C-methyltransferase
L2_013_122G1_scaffold_501_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28859..29278
DNA (420bp) protein (140aa)
Acetyltransferase, GNAT family n=2 Tax=Eubacterium RepID=C0ERM3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG38075.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Acetyltransferase (GNAT) family.
L2_013_122G1_scaffold_501_28
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29487..30455
DNA (969bp) protein (323aa)
porphobilinogen synthase (EC:4.2.1.24)
Porphobilinogen synthase n=2 Tax=Eubacterium RepID=C0ERM2_9FIRM
Porphobilinogen synthase {ECO:0000313|EMBL:CDB18576.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_501_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30740..31066
DNA (327bp) protein (109aa)
FeoA domain protein n=2 Tax=Eubacterium RepID=C0EZX7_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CDB18577.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ferrous iron transport protein B
L2_013_122G1_scaffold_501_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31070..33082
DNA (2013bp) protein (671aa)
Ferrous iron transport protein B n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZX8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EEG35173.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ferrous iron transport protein B
Displaying items 1-30 of 32 in total

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