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L2_013_122G1_scaffold_519

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_519_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(252..1004)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JRI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66630.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L2_013_122G1_scaffold_519_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1216..2541
DNA (1326bp) protein (442aa)
Transposase, IS4 family n=3 Tax=Lachnospiraceae RepID=A7B2R8_RUMGN
Transposase, IS4 family {ECO:0000313|EMBL:EDN77867.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transposase IS4 family protein
L2_013_122G1_scaffold_519_3
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2956..3045)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MYM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75898.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L2_013_122G1_scaffold_519_4
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3048..4868)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38356.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
putative endo-1,4-beta-xylanase
L2_013_122G1_scaffold_519_5
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4894..5052)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22664.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_013_122G1_scaffold_519_6
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5242..5631)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22664.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
beta-xylosidase
L2_013_122G1_scaffold_519_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5628..6149)
DNA (522bp) protein (174aa)
xylA1; xylosidase/arabinosidase XylA (EC:3.2.1.37 3.2.1.55)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22664.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_013_122G1_scaffold_519_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6197..6325)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22664.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
xylosidase/arabinosidase
L2_013_122G1_scaffold_519_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6390..8588)
DNA (2199bp) protein (733aa)
Alpha-L-rhamnosidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T3V4_ROSHA
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AEN97241.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_013_122G1_scaffold_519_10
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8641..9489)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22665.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
xylose isomerase domain-containing protein
L2_013_122G1_scaffold_519_11
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9534..11765)
DNA (2232bp) protein (744aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9ILH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22666.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Beta-glucuronidase
L2_013_122G1_scaffold_519_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11989..14283)
DNA (2295bp) protein (765aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL26988.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL26988.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Beta-glucosidase-related glycosidases n=1 Tax=Ruminococcus torques L2-14 RepID=D4LYX8_9FIRM
L2_013_122G1_scaffold_519_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14401..15606)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KCI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41157.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_013_122G1_scaffold_519_14
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15810..17096
DNA (1287bp) protein (429aa)
Beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUP5_9FIRM
Beta-glucosidase {ECO:0000313|EMBL:EOS22667.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
aryl-beta-glucosidase
L2_013_122G1_scaffold_519_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17304..18983)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJZ0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94884.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_013_122G1_scaffold_519_16
unknown

Not on your lists

comp(19132..19356)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_013_122G1_scaffold_519_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19319..20797)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9ILI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22668.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
sugar transporter
L2_013_122G1_scaffold_519_18
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20905..22473)
DNA (1569bp) protein (523aa)
Sialic acid-specific 9-O-acetylesterase n=2 Tax=Vibrio parahaemolyticus RepID=A6AXJ1_VIBPH
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:EDM61615.1}; TaxID=419109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus serotype O3:K6 (strain AQ3810).;"
hypothetical protein
L2_013_122G1_scaffold_519_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(22536..23576)
DNA (1041bp) protein (347aa)
Putative lipase/esterase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJM1_9FIRM
Putative lipase/esterase {ECO:0000313|EMBL:CDC43256.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
esterase/lipase-like protein
L2_013_122G1_scaffold_519_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23590..25062)
DNA (1473bp) protein (491aa)
Glycosyl hydrolase, family 43 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKC3_9FIRM
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFB76844.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
beta-xylosidase
L2_013_122G1_scaffold_519_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25086..27503)
DNA (2418bp) protein (806aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKC6_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFB76847.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Beta-galactosidase/beta-glucuronidase
L2_013_122G1_scaffold_519_22
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27646..28713
DNA (1068bp) protein (356aa)
Transcriptional regulator AraC family n=1 Tax=Blautia sp. CAG:52 RepID=R6H5L0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDB21577.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
AraC-type DNA-binding domain-containing proteins
L2_013_122G1_scaffold_519_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28710..30065)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL56_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS22669.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
putative efflux protein, MATE family
L2_013_122G1_scaffold_519_24
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30324..30554
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9ILI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22673.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_013_122G1_scaffold_519_25
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30602..31510
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IL61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22674.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
AraC family transcriptional regulator
Displaying 25 items

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