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L2_013_122G1_scaffold_536

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_536_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..309)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57127.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
transketolase, C-terminal domain-containing protein
L2_013_122G1_scaffold_536_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(313..1155)
DNA (843bp) protein (281aa)
carbohydrate degradation protein n=1 Tax=Clostridium arbusti RepID=UPI0002895770
transketolase, beta subunit
Transketolase, beta subunit {ECO:0000313|EMBL:AGK98774.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_013_122G1_scaffold_536_3
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1174..2289)
DNA (1116bp) protein (372aa)
4-hydroxybutyrate dehydrogenase n=1 Tax=Clostridium arbusti RepID=UPI0002895F4A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07713.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L2_013_122G1_scaffold_536_4
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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2719..3744
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family id=4020369 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
LacI family transcriptional regulator
Tax=GWC2_Clostridiales_40_7_curated
L2_013_122G1_scaffold_536_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3900..5204
DNA (1305bp) protein (435aa)
Putative butyryl-CoA:acetate CoA-transferase n=2 Tax=Oscillibacter RepID=U2S670_9FIRM
Putative butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:ERK59702.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
acetyl-CoA hydrolase/transferase
L2_013_122G1_scaffold_536_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5206..6012
DNA (807bp) protein (269aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein n=2 Tax=Oscillibacter RepID=U2QP48_9FIRM
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ERK59701.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_013_122G1_scaffold_536_7
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6073..7089
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00037A5EE0
putative Sialic acid-binding periplasmic protein siaP
Putative Sialic acid-binding periplasmic protein siaP {ECO:0000313|EMBL:CDI12320.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
L2_013_122G1_scaffold_536_8
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7126..7623
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036BABD6
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDI12321.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
L2_013_122G1_scaffold_536_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7639..8934
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000362C703
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EEQ58194.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
TRAP dicarboxylate transporter, DctM subunit
L2_013_122G1_scaffold_536_10
Listeria welshimeri, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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9053..9718
DNA (666bp) protein (222aa)
Ribulose-5-phosphate 3-epimerase {ECO:0000313|EMBL:CAK20122.1}; EC=5.1.3.1 {ECO:0000313|EMBL:CAK20122.1};; TaxID=386043 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 /; SLCC5334).;"
Ribulose-5-phosphate 3-epimerase n=1 Tax=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) RepID=A0AGJ0_LISW6
ribulose-5-phosphate 3-epimerase
L2_013_122G1_scaffold_536_11
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9721..10737
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FX50_9CLOT
alcohol dehydrogenase
Tax=BJP_IG2157_Clostridiales_35_16
L2_013_122G1_scaffold_536_12
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10755..11558
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYU0_MAHA5
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEE95685.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_013_122G1_scaffold_536_13
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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11685..12755
DNA (1071bp) protein (357aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
D-mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BH43_9FIRM
L2_013_122G1_scaffold_536_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12812..14401
DNA (1590bp) protein (530aa)
mtlD; MtlD (EC:1.1.1.57)
Mannitol dehydrogenase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPR0_9FIRM
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EFB75256.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_013_122G1_scaffold_536_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14488..14859
DNA (372bp) protein (124aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Uronate isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4S5_9CLOT
glucuronate isomerase
L2_013_122G1_scaffold_536_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14865..15266
DNA (402bp) protein (134aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Uronate isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4S5_9CLOT
glucuronate isomerase
L2_013_122G1_scaffold_536_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15283..15927
DNA (645bp) protein (215aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSN2_9CLOT
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EOQ35266.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
2-dehydro-3-deoxyphosphooctonate aldolase
L2_013_122G1_scaffold_536_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15920..16264
DNA (345bp) protein (115aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97571.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_013_122G1_scaffold_536_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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16288..17313
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
2-dehydro-3-deoxygluconokinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH45_9FIRM
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EGJ45684.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_013_122G1_scaffold_536_20
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17765..18625
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WS61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05425.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
RpiR family transcriptional regulator
L2_013_122G1_scaffold_536_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18807..19568
DNA (762bp) protein (254aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAT8_9FIRM
Spermidine/putrescine transport system ATP-binding protein {ECO:0000313|EMBL:EGJ47466.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_013_122G1_scaffold_536_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19531..22212
DNA (2682bp) protein (894aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67469.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type Fe3+ transport system, permease component
L2_013_122G1_scaffold_536_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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22282..23391
DNA (1110bp) protein (370aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB77_9FIRM
2-aminoethylphosphonate--pyruvate transaminase
L2_013_122G1_scaffold_536_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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23379..24155
DNA (777bp) protein (259aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF88_9FIRM
hypothetical protein
L2_013_122G1_scaffold_536_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24453..25229)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN02094.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_013_122G1_scaffold_536_26
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25222..25704)
DNA (483bp) protein (161aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LRU8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS61534.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
RNA polymerase ECF subfamily sigma factor
L2_013_122G1_scaffold_536_27
unknown

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comp(25727..26026)
DNA (300bp) protein (100aa)

This feature has no annotations

L2_013_122G1_scaffold_536_28
unknown

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26531..26692
DNA (162bp) protein (54aa)

This feature has no annotations

L2_013_122G1_scaffold_536_29
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26679..28055
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N9A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88391.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
AlgI protein
L2_013_122G1_scaffold_536_30
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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28070..29215
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KTG8_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97820.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Displaying items 1-30 of 33 in total

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