ggKbase home page

L2_013_122G1_scaffold_538

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_538_1
unknown

Not on your lists

2..106
DNA (105bp) protein (35aa)

This feature has no annotations

L2_013_122G1_scaffold_538_2
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129..2105
DNA (1977bp) protein (659aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
FtsH-2 peptidase (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RM95_MOOTA
L2_013_122G1_scaffold_538_3
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2338..3558
DNA (1221bp) protein (407aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N8J6_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFI41765.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
sodium:dicarboxylate symporter
L2_013_122G1_scaffold_538_4
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3736..4605
DNA (870bp) protein (290aa)
Ferredoxin-NADP reductase {ECO:0000313|EMBL:KJS22452.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KJS22452.1};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
ferredoxin-NADP(+) reductase subunit alpha (EC:1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIB2_MOOTA
L2_013_122G1_scaffold_538_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4608..6002
DNA (1395bp) protein (465aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LVZ1_SELS3
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KJS22453.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
L2_013_122G1_scaffold_538_6
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6062..9421
DNA (3360bp) protein (1120aa)
addB; ATP-dependent helicase/deoxyribonuclease subunit B (EC:3.1.-.- 3.6.4.12)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000313|EMBL:AHM55581.1}; EC=3.1.-.- {ECO:0000313|EMBL:AHM55581.1};; EC=3.6.4.12 {ECO:0000313|EMBL:AHM55581.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Putative ATP-dependent nuclease subunit B n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTC3_FILAD
L2_013_122G1_scaffold_538_7
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9418..12846
DNA (3429bp) protein (1143aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTC4_FILAD
ATP-dependent nuclease subunit A
L2_013_122G1_scaffold_538_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12855..14018)
DNA (1164bp) protein (388aa)
UPF0348 protein HMPREF0372_00432 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLR2_9FIRM
UPF0348 protein HMPREF0372_00432 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_013_122G1_scaffold_538_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14292..14831
DNA (540bp) protein (180aa)
Putative ACR, COG1399 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z6F5_9FIRM
Putative ACR, COG1399 {ECO:0000313|EMBL:EDM51380.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L2_013_122G1_scaffold_538_10
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14832..15044
DNA (213bp) protein (71aa)
50S ribosomal protein L32 n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UVT6_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rpmF; putative 50S ribosomal protein L32
L2_013_122G1_scaffold_538_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15104..16927
DNA (1824bp) protein (608aa)
GTP-binding protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037891D3
GTP-binding protein TypA {ECO:0000313|EMBL:KJS22703.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
typA; tyrosine phosphorylated protein A
L2_013_122G1_scaffold_538_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16956..17639
DNA (684bp) protein (228aa)
UbiE/COQ5 methyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CEF8_9CLOT
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EOD00680.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
UbiE/COQ5 methyltransferase
L2_013_122G1_scaffold_538_13
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17885..19555)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DI55_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF93820.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
L2_013_122G1_scaffold_538_14
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19596..20480)
DNA (885bp) protein (295aa)
Nitrate reductase, gamma subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J4H2_DESRM
nitrate reductase subunit gamma
Nitrate reductase, gamma subunit {ECO:0000313|EMBL:ABO49975.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L2_013_122G1_scaffold_538_15
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20771..22474
DNA (1704bp) protein (568aa)
CoA-disulfide reductase (EC:1.8.1.14)
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NKU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS19718.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
L2_013_122G1_scaffold_538_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22490..24100
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036AD511
DEAD/DEAH box helicase {ECO:0000313|EMBL:KJS19723.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
DEAD/DEAH box helicase
L2_013_122G1_scaffold_538_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24122..25369
DNA (1248bp) protein (416aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035FF3EC
thiamine biosynthesis protein ThiI
L2_013_122G1_scaffold_538_18
unknown

Not on your lists

25362..25517
DNA (156bp) protein (52aa)

This feature has no annotations

L2_013_122G1_scaffold_538_19
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25637..26632)
DNA (996bp) protein (332aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036A2524
L2_013_122G1_scaffold_538_20
Leersia perrieri, Leersia, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

27884..29011
DNA (1128bp) protein (376aa)
Translation initiation factor IF-2
Uncharacterized protein {ECO:0000313|EnsemblPlants:LPERR06G20260.1}; TaxID=77586 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia.;" source="Leersia perrieri.;"
L2_013_122G1_scaffold_538_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29110..29592
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63277.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_013_122G1_scaffold_538_22
unknown

Not on your lists

29742..30011
DNA (270bp) protein (90aa)

This feature has no annotations

L2_013_122G1_scaffold_538_23
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30849..31394
DNA (546bp) protein (182aa)
Integrase core domain protein n=11 Tax=Peptostreptococcus anaerobius RepID=D3MS44_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EFD05048.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
integrase
L2_013_122G1_scaffold_538_24
Streptococcus dysgalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31644..32135
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124) RepID=C5WHH0_STRDG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH81835.1}; TaxID=486410 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124).;"
Displaying 24 items

View Taxonomy