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L2_013_122G1_scaffold_564

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_564_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..1156
DNA (1155bp) protein (385aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Threonine--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Y8_9ACTN
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase
L2_013_122G1_scaffold_564_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1483..2073
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Y7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40496.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
NusG antitermination factor
L2_013_122G1_scaffold_564_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2117..2908
DNA (792bp) protein (264aa)
Bacterial sugar transferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73610.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Sugar transferases involved in lipopolysaccharide synthesis
L2_013_122G1_scaffold_564_4
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2909..4015
DNA (1107bp) protein (369aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:KFI85947.1}; EC=2.4.1.57 {ECO:0000313|EMBL:KFI85947.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Capsular polysaccharide biosynthesis proteinCps4H n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A386_BIFAA
capsular polysaccharide biosynthesis proteinCps4H
L2_013_122G1_scaffold_564_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4016..5020
DNA (1005bp) protein (335aa)
Glycosyl transferase family 2 n=3 Tax=Eggerthella RepID=C8WM64_EGGLE
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV54618.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
L2_013_122G1_scaffold_564_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5200..6246
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRY1_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70525.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_013_122G1_scaffold_564_7
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6257..7345
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N5V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC01646.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L2_013_122G1_scaffold_564_8
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7350..8477
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38539.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Coenzyme F420-reducing hydrogenase, beta subunit
L2_013_122G1_scaffold_564_9
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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8532..9527
DNA (996bp) protein (332aa)
Glycosyltransferase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E6P1_9ACTN
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL03388.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_013_122G1_scaffold_564_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9528..10952
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRY3_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70527.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_013_122G1_scaffold_564_11
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11543..12007
DNA (465bp) protein (155aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
UvrD/REP helicase n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WNI1_9ACTN
L2_013_122G1_scaffold_564_12
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12283..13887
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIX3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEZ60321.1}; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
hypothetical protein
L2_013_122G1_scaffold_564_13
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14810..15910
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Bacillus thuringiensis RepID=UPI00034A8C4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY77724.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L2_013_122G1_scaffold_564_14
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15913..16731
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RYB9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY77725.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L2_013_122G1_scaffold_564_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17028..19166
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40476.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_013_122G1_scaffold_564_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19163..20068
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36059.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_122G1_scaffold_564_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20065..21945
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB58_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36060.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_122G1_scaffold_564_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21942..23369
DNA (1428bp) protein (476aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EBA40473.1}; EC=2.4.-.- {ECO:0000313|EMBL:EBA40473.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W4_9ACTN
Glycosyltransferase
L2_013_122G1_scaffold_564_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23373..24917
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4N2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36062.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative membrane spanning protein
L2_013_122G1_scaffold_564_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24907..26676
DNA (1770bp) protein (590aa)
CotH protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8R5_9ACTN
CotH protein {ECO:0000313|EMBL:CDA36063.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
CotH protein.
L2_013_122G1_scaffold_564_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26663..27454
DNA (792bp) protein (264aa)
VTC domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHP7_9ACTN
VTC domain protein {ECO:0000313|EMBL:CDA36064.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
VTC domain.
L2_013_122G1_scaffold_564_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27458..28123
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB62_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36065.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_122G1_scaffold_564_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28210..29223
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73472.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LacI family transcriptional regulator
L2_013_122G1_scaffold_564_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29408..30808
DNA (1401bp) protein (467aa)
PTS system glucose-like transporter subunit IIB (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73473.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_013_122G1_scaffold_564_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30870..32306
DNA (1437bp) protein (479aa)
Glycosyl hydrolase family 32 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V6_9ACTN
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EBA40465.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycosyl transferase family protein
L2_013_122G1_scaffold_564_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32402..33406
DNA (1005bp) protein (335aa)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V5_9ACTN
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EBA40464.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
L2_013_122G1_scaffold_564_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33396..33740)
DNA (345bp) protein (115aa)
Transcriptional regulator LysR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEW8_9ACTN
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA35109.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
N-terminal domain of molybdenum-binding protein
Displaying 27 items

View Taxonomy