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L2_013_122G1_scaffold_566

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_566_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(297..1754)
DNA (1458bp) protein (486aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=3 Tax=Lachnospiraceae RepID=C9LCI9_BLAHA
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|SAAS:SAAS00063387}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L2_013_122G1_scaffold_566_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1923..3629)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036CA871
Putative serine protease HtrA {ECO:0000313|EMBL:CDC09486.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_013_122G1_scaffold_566_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3737..4654)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369038E
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC47802.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_013_122G1_scaffold_566_4
unknown

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comp(4623..4763)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_013_122G1_scaffold_566_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4834..6099)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RR16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47799.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cell envelope-related function transcriptional attenuator common domain
L2_013_122G1_scaffold_566_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(6118..7515)
DNA (1398bp) protein (466aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RXM4_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDC47796.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Undecaprenyl-phosphate glucose phosphotransferase
L2_013_122G1_scaffold_566_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7601..9469)
DNA (1869bp) protein (623aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VUK7_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD00690.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_013_122G1_scaffold_566_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(9492..10448)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RXL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47791.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted glycosyltransferases
L2_013_122G1_scaffold_566_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(10460..12286)
DNA (1827bp) protein (609aa)
Predicted glycosyltransferases n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFY5_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CDC47788.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted glycosyltransferases
L2_013_122G1_scaffold_566_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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12433..13641
DNA (1209bp) protein (403aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SMF6_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDC47782.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_122G1_scaffold_566_11
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13734..16214)
DNA (2481bp) protein (827aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YP48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD66193.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_013_122G1_scaffold_566_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16226..16831)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74609.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L2_013_122G1_scaffold_566_13
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16848..17579)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YPB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD66191.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
teichoic acid ABC transporter ATP-binding protein
L2_013_122G1_scaffold_566_14
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17590..18366)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RW16_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type polysaccharide/polyol phosphate export systems permease
L2_013_122G1_scaffold_566_15
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(18433..18738)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WBI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91562.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Branched-chain amino acid transport protein (AzlD).
L2_013_122G1_scaffold_566_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(18735..19439)
DNA (705bp) protein (235aa)
Branched-chain amino acid transporter n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RQY5_9FIRM
Branched-chain amino acid transporter {ECO:0000313|EMBL:CDC47764.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
branched-chain amino acid transporter
L2_013_122G1_scaffold_566_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(19527..19790)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47763.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Phosphotransferase System HPr (HPr) Family
L2_013_122G1_scaffold_566_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(19813..21111)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SMD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47762.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_566_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(21089..21979)
DNA (891bp) protein (297aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJ14_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC47760.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
conserved hypothetical protein TIGR00159
L2_013_122G1_scaffold_566_20
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22060..23091)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCJ7_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20126.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_013_122G1_scaffold_566_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23094..23519)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6PI51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09462.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L2_013_122G1_scaffold_566_22
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23599..24321)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NEA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09460.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
amidophosphoribosyltransferase
L2_013_122G1_scaffold_566_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(24318..26549)
DNA (2232bp) protein (744aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIZ6_9FIRM
L2_013_122G1_scaffold_566_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26577..27569)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47743.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_122G1_scaffold_566_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(27700..30333)
DNA (2634bp) protein (878aa)
UvrABC system protein A n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RXG7_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
excinuclease ABC, A subunit
Displaying 25 items

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