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L2_013_122G1_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_576_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1304
DNA (1302bp) protein (434aa)
DNA polymerase III, subunit gamma and tau n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5I0_9CLOT
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EOQ39811.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
DNA polymerase III subunits gamma and tau
L2_013_122G1_scaffold_576_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1320..1676
DNA (357bp) protein (119aa)
Nucleoid-associated protein HMPREF1526_00507 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4E7_9CLOT
Nucleoid-associated protein HMPREF1526_00507 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_013_122G1_scaffold_576_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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1676..2275
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6N5_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
recR; recombination protein RecR
L2_013_122G1_scaffold_576_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3117..4712
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4K5_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
prfC; Peptide chain release factor 3
L2_013_122G1_scaffold_576_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4999..7341)
DNA (2343bp) protein (781aa)
ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W528_9CLOT
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EOQ40015.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_122G1_scaffold_576_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7458..7892)
DNA (435bp) protein (145aa)
YolD-like family protein n=1 Tax=Clostridium difficile CD113 RepID=T4YDC3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDS13203.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_013_122G1_scaffold_576_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7901..9412)
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31514.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
UMUC domain-containing protein DNA-repair protein
L2_013_122G1_scaffold_576_8
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9836..10855
DNA (1020bp) protein (340aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X9C6_9FIRM
ABC transporter
L2_013_122G1_scaffold_576_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10842..11495
DNA (654bp) protein (218aa)
metI; D-methionine ABC transporter permease protein MetI (EC:3.6.3.-)
D-methionine ABC transporter permease n=4 Tax=Clostridium RepID=N9X8C9_9CLOT
D-methionine ABC transporter permease {ECO:0000313|EMBL:ENZ11455.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_013_122G1_scaffold_576_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11545..11766
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNZ1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16225.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_013_122G1_scaffold_576_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11972..12811
DNA (840bp) protein (280aa)
Lipoprotein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VST3_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
NLPA lipoprotein
L2_013_122G1_scaffold_576_12
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12883..13416)
DNA (534bp) protein (178aa)
6-O-methylguanine DNA methyltransferase DNA binding domain protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JS40_9PROT
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDB52922.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
methylated-DNA--protein-cysteine methyltransferase
L2_013_122G1_scaffold_576_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13525..14442)
DNA (918bp) protein (306aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5B0_9CLOT
malonyl CoA-acyl carrier protein transacylase
L2_013_122G1_scaffold_576_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14592..15581
DNA (990bp) protein (330aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W468_9CLOT
L2_013_122G1_scaffold_576_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15598..16545
DNA (948bp) protein (316aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39739.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_122G1_scaffold_576_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16556..17284
DNA (729bp) protein (243aa)
fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4D8_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EOQ39738.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_122G1_scaffold_576_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17396..18625
DNA (1230bp) protein (410aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRV6_9CLOT
3-oxoacyl-(acyl-carrier-protein) synthase 2
L2_013_122G1_scaffold_576_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18633..19103
DNA (471bp) protein (157aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5A5_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EOQ39736.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_122G1_scaffold_576_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19501..19929
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W463_9CLOT
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ {ECO:0000313|EMBL:EOQ39735.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_013_122G1_scaffold_576_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19943..21289
DNA (1347bp) protein (449aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4U1_9CLOT
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EOQ39734.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acetyl-CoA carboxylase, biotin carboxylase subunit
L2_013_122G1_scaffold_576_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21305..22180
DNA (876bp) protein (292aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4D4_9CLOT
L2_013_122G1_scaffold_576_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22173..22991
DNA (819bp) protein (273aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00176990}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W983_9CLOT
L2_013_122G1_scaffold_576_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22997..23224
DNA (228bp) protein (76aa)
Acyl carrier protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5A1_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acpP; acyl carrier protein
L2_013_122G1_scaffold_576_24
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23288..24316)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KS56_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00073.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_013_122G1_scaffold_576_25
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24282..24782)
DNA (501bp) protein (167aa)
RNA polymerase ECF subfamily sigma factor n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KS57_OSCVS
RNA polymerase ECF subfamily sigma factor
RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:BAL00074.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_013_122G1_scaffold_576_26
unknown

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24906..25511
DNA (606bp) protein (202aa)

This feature has no annotations

L2_013_122G1_scaffold_576_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25559..25945)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37331.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
endoribonuclease L-PSP
L2_013_122G1_scaffold_576_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25975..27801)
DNA (1827bp) protein (609aa)
GTP-binding protein TypA/BipA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2G0_9CLOT
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EOQ37332.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
typA; GTP-binding protein TypA
L2_013_122G1_scaffold_576_29
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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28086..29216
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W9A2_9CLOT
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
L2_013_122G1_scaffold_576_30
unknown

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comp(29306..29497)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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