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L2_013_122G1_scaffold_648

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_648_1
unknown

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comp(1..489)
DNA (489bp) protein (163aa)

This feature has no annotations

L2_013_122G1_scaffold_648_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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618..896
DNA (279bp) protein (93aa)
Sigma-70 region 2 n=2 Tax=Oscillibacter RepID=U2S631_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ERK59662.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_013_122G1_scaffold_648_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(1010..3505)
DNA (2496bp) protein (832aa)
Uncharacterized protein (Fragment) n=2 Tax=Firmicutes bacterium ASF500 RepID=V2YE40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13461.1}; Flags: Fragment;; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
O-antigen polymerase
L2_013_122G1_scaffold_648_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3518..4900)
DNA (1383bp) protein (461aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y7_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EHO35281.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
undecaprenyl-phosphate glucose phosphotransferase
L2_013_122G1_scaffold_648_5
unknown

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comp(4962..6527)
DNA (1566bp) protein (522aa)

This feature has no annotations

L2_013_122G1_scaffold_648_6
unknown

Not on your lists

comp(6617..7882)
DNA (1266bp) protein (422aa)

This feature has no annotations

L2_013_122G1_scaffold_648_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8045..10654)
DNA (2610bp) protein (870aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28591.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ig domain-containing protein
L2_013_122G1_scaffold_648_8
unknown

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10872..12230
DNA (1359bp) protein (453aa)

This feature has no annotations

L2_013_122G1_scaffold_648_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12742..13878)
DNA (1137bp) protein (379aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBK96784.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBK96784.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
UDP-galactopyranose mutase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUL5_9FIRM
L2_013_122G1_scaffold_648_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13880..14455)
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T564_ROSHA
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEN97552.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_013_122G1_scaffold_648_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14452..15375)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F18EC
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN97553.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_013_122G1_scaffold_648_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15377..16486)
DNA (1110bp) protein (370aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036713D7
Uncharacterized protein {ECO:0000313|EMBL:CDC93836.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L2_013_122G1_scaffold_648_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16444..17226)
DNA (783bp) protein (261aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CBK96789.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CBK96789.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUM0_9FIRM
L2_013_122G1_scaffold_648_14
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17248..18441)
DNA (1194bp) protein (398aa)
SAM-dependent methyltransferase n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B5CB09
Methyltransferase FkbM family {ECO:0000313|EMBL:CCY66526.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
methyltransferase, FkbM family
L2_013_122G1_scaffold_648_15
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18473..20491)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F454E
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDE85805.1}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L2_013_122G1_scaffold_648_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(20511..21512)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13454.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_013_122G1_scaffold_648_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21509..22342)
DNA (834bp) protein (278aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XVV7_DESHA
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EHL04220.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
Glycosyltransferases involved in cell wall biogenesis
L2_013_122G1_scaffold_648_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22329..23066)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C802_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35296.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_013_122G1_scaffold_648_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23079..24269)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A18C1
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter
L2_013_122G1_scaffold_648_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24979..25320
DNA (342bp) protein (114aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO24335.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_013_122G1_scaffold_648_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25563..25763
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C9L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81205.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative transposase
L2_013_122G1_scaffold_648_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25760..26578
DNA (819bp) protein (273aa)
Integrase core domain protein n=7 Tax=Clostridiales RepID=U2BSR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO18247.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative transposase, IS861
L2_013_122G1_scaffold_648_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27010..27273)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM41337.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
HTH domain-containing protein
L2_013_122G1_scaffold_648_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27270..29012)
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21783.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_013_122G1_scaffold_648_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29151..29954)
DNA (804bp) protein (268aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CN47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO17570.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying 25 items

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