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L2_013_122G1_scaffold_1379

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_1379_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..871
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM90_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92968.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L2_013_122G1_scaffold_1379_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1017..1595
DNA (579bp) protein (193aa)
Isochorismatase family protein {ECO:0000313|EMBL:EWC94396.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWC94396.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Isochorismatase hydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W877_ATOPD
isochorismatase hydrolase
L2_013_122G1_scaffold_1379_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2173..2562)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W875_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC91929.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_122G1_scaffold_1379_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2810..3532
DNA (723bp) protein (241aa)
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W874_ATOPD
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC91921.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
XRE family transcriptional regulator
L2_013_122G1_scaffold_1379_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3965..4378
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F7C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07833.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_122G1_scaffold_1379_6
unknown

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4428..4538
DNA (111bp) protein (37aa)

This feature has no annotations

L2_013_122G1_scaffold_1379_7
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4977..5462
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A5C7_9ACTN
Flavodoxin {ECO:0000313|EMBL:EWC94337.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative flavodoxin
L2_013_122G1_scaffold_1379_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5740..5982)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W869_ATOPD
PF11213 family protein {ECO:0000313|EMBL:EWC94336.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L2_013_122G1_scaffold_1379_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5982..7343)
DNA (1362bp) protein (454aa)
Beta-lactamase domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W868_ATOPD
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EWC91927.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
beta-lactamase domain-containing protein
L2_013_122G1_scaffold_1379_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7383..8204)
DNA (822bp) protein (274aa)
30S ribosomal protein S12 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W867_ATOPD
Esterase domain protein {ECO:0000313|EMBL:EWC91925.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
30S ribosomal protein S12
L2_013_122G1_scaffold_1379_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8206..10542)
DNA (2337bp) protein (779aa)
Sodium/hydrogen exchanger n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W866_ATOPD
Transporter, CPA2 family {ECO:0000313|EMBL:EWC94339.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
sodium/hydrogen exchanger
L2_013_122G1_scaffold_1379_12
unknown

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comp(10509..10742)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_013_122G1_scaffold_1379_13
Atopobium rimae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(11059..11880)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CP40_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEE16747.1}; TaxID=553184 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium rimae ATCC 49626.;"
hypothetical protein
Displaying 13 items

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