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L2_013_122G1_scaffold_1605

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_1605_1
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2..631)
DNA (630bp) protein (210aa)
Transcriptional regulator, LysR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B1_ATOPD
LysR substrate-binding domain protein {ECO:0000313|EMBL:EWC94527.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
LysR family transcriptional regulator
L2_013_122G1_scaffold_1605_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(830..1765)
DNA (936bp) protein (312aa)
Cell division protein FtsX n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B2_ATOPD
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell division protein FtsX
L2_013_122G1_scaffold_1605_3
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1743..2771)
DNA (1029bp) protein (343aa)
Cell division ATP-binding protein FtsE n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B3_ATOPD
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EWC94533.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell division ATP-binding protein FtsE
L2_013_122G1_scaffold_1605_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2963..3613)
DNA (651bp) protein (217aa)
KDPG and KHG aldolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B4_ATOPD
KDPG and KHG aldolase {ECO:0000313|EMBL:EWC92245.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
KDPG and KHG aldolase
L2_013_122G1_scaffold_1605_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3686..4582)
DNA (897bp) protein (299aa)
Dihydrodipicolinate synthetase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B5_ATOPD
Putative 4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000313|EMBL:EWC95935.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
dihydrodipicolinate synthetase
L2_013_122G1_scaffold_1605_6
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4621..5229)
DNA (609bp) protein (203aa)
Sugar isomerase (SIS) n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B6_ATOPD
SIS domain protein {ECO:0000313|EMBL:EWC96008.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
sugar isomerase (SIS)
L2_013_122G1_scaffold_1605_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5286..5885)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B7_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC92270.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_122G1_scaffold_1605_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5985..7292)
DNA (1308bp) protein (436aa)
Putative sugar-specific permease SgaT/UlaA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B8_ATOPD
PTS system sugar-specific permease component {ECO:0000313|EMBL:EWC96001.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative sugar-specific permease SgaT/UlaA
L2_013_122G1_scaffold_1605_9
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(7455..7754)
DNA (300bp) protein (100aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B9_ATOPD
PTS system, lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EWC95998.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L2_013_122G1_scaffold_1605_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7754..8209)
DNA (456bp) protein (152aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C0_ATOPD
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2 component {ECO:0000313|EMBL:EWC92278.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
putative PTS IIA-like nitrogen-regulatory protein PtsN
L2_013_122G1_scaffold_1605_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8590..9372
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C1_ATOPD
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EWC95977.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
DeoR family transcriptional regulator
Displaying 11 items

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