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L2_013_122G1_scaffold_1608

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_1608_1
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3..83)
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8P4_ATOPD
Sugar efflux transporter for intercellular exchange {ECO:0000313|EMBL:EWC94726.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L2_013_122G1_scaffold_1608_2
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(178..1167)
DNA (990bp) protein (330aa)
Abortive infection protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8P7_ATOPD
CAAX protease self-immunity {ECO:0000313|EMBL:EWC92361.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
abortive infection protein
L2_013_122G1_scaffold_1608_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1255..1863)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8P8_ATOPD
L-2-amino-thiazoline-4-carboxylic acid hydrolase {ECO:0000313|EMBL:EWC92288.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_122G1_scaffold_1608_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1975..2742)
DNA (768bp) protein (256aa)
Pnp/Udp family phosphorylase n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B43C73
Phosphorylase family protein {ECO:0000313|EMBL:EWC94708.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
phosphorylase (pnp/udp family)
L2_013_122G1_scaffold_1608_5
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2921..3202
DNA (282bp) protein (94aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Atopobium vaginae DSM 15829 RepID=F1T6W9_9ACTN
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EWC92263.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein
L2_013_122G1_scaffold_1608_6
Atopobium vaginae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3208..3486
DNA (279bp) protein (93aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Atopobium vaginae DSM 15829 RepID=F1T6X0_9ACTN
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EGF22699.1}; TaxID=525256 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium vaginae DSM 15829.;"
RelE/StbE family addiction module toxin
L2_013_122G1_scaffold_1608_7
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3462..4223)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8P9_ATOPD
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EWC94727.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L2_013_122G1_scaffold_1608_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4253..5512)
DNA (1260bp) protein (420aa)
RNA methyltransferase, TrmA family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8Q1_ATOPD
N2,N2-dimethylguanosine tRNA methyltransferase-like protein {ECO:0000313|EMBL:EWC94719.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
TrmA family RNA methyltransferase
L2_013_122G1_scaffold_1608_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5683..6651
DNA (969bp) protein (323aa)
Lactate/malate dehydrogenase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8Q2_ATOPD
Lactate/malate dehydrogenase, alpha/beta C-terminal domain protein {ECO:0000313|EMBL:EWC91910.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
lactate/malate dehydrogenase
L2_013_122G1_scaffold_1608_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7323..8315
DNA (993bp) protein (331aa)
Band 7 protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8Q3_ATOPD
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:EWC94137.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_122G1_scaffold_1608_11
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8333..8533
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8Q4_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50492.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L2_013_122G1_scaffold_1608_12
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8535..9785
DNA (1251bp) protein (417aa)
ABC transporter related n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8Q5_ATOPD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACV50493.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
Displaying 12 items

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