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L2_013_122G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_42_1
unknown

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1..213
DNA (213bp) protein (71aa)

This feature has no annotations

L2_013_122G1_scaffold_42_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1236..1553
DNA (318bp) protein (106aa)
BMC domain protein n=2 Tax=Eubacterium RepID=C0F077_9FIRM
BMC domain protein {ECO:0000313|EMBL:EEG35072.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_122G1_scaffold_42_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1712..2419
DNA (708bp) protein (236aa)
Acyl-ACP thioesterase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GEE6_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:CCY14319.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Acyl-ACP thioesterase
L2_013_122G1_scaffold_42_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2453..3298
DNA (846bp) protein (282aa)
S1 RNA binding domain protein n=2 Tax=Eubacterium RepID=C0F079_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CDB19186.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
RNA-binding S1 domain-containing protein
L2_013_122G1_scaffold_42_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3316..4335
DNA (1020bp) protein (340aa)
CAAX amino terminal protease family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F080_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEG35075.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
CAAX amino terminal protease family.
L2_013_122G1_scaffold_42_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4511..6121)
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP06_9FIRM
L2_013_122G1_scaffold_42_7
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6498..7883
DNA (1386bp) protein (462aa)
3-dehydroquinate synthase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MG34_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:EFV01574.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
glycerol-1-phosphate dehydrogenase
L2_013_122G1_scaffold_42_8
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7933..9486
DNA (1554bp) protein (518aa)
Putative ribulokinase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MG35_9FIRM
Putative ribulokinase {ECO:0000313|EMBL:EFV01575.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
putative sugar kinase
L2_013_122G1_scaffold_42_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9523..10290
DNA (768bp) protein (256aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9X7_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CCY12709.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
3-ketoacyl-ACP reductase
L2_013_122G1_scaffold_42_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10315..11148
DNA (834bp) protein (278aa)
Xylose isomerase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GIP2_9FIRM
Xylose isomerase domain protein {ECO:0000313|EMBL:CCY12707.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Xylose isomerase domain-containing protein TIM barrel
L2_013_122G1_scaffold_42_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11227..12060)
DNA (834bp) protein (278aa)
Transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAF5_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY14315.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcriptional regulator, AraC/XylS family protein
L2_013_122G1_scaffold_42_12
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12306..13226
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GD39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19181.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
dTDP-glucose pyrophosphorylase
L2_013_122G1_scaffold_42_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13183..14160)
DNA (978bp) protein (326aa)
Transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAX1_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY14313.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
AraC family transcriptional regulator
L2_013_122G1_scaffold_42_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14488..15054
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14312.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15069..16496
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14311.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16493..18535
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14310.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18536..20113
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GED7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14309.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20248..21078
DNA (831bp) protein (277aa)
FHA domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAW7_9FIRM
FHA domain protein {ECO:0000313|EMBL:CCY14308.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
FHA domain-containing protein
L2_013_122G1_scaffold_42_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21071..22711
DNA (1641bp) protein (547aa)
Cell cycle protein FtsW/RodA/SpoVE family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNG8_9FIRM
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CCY14307.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cell cycle protein
L2_013_122G1_scaffold_42_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22782..23828
DNA (1047bp) protein (349aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNZ6_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CCY14306.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ftsI; cell division protein FtsI/penicillin-binding protein 2
L2_013_122G1_scaffold_42_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23834..24634)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14305.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24757..25179
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H209_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33336.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
conserved hypothetical protein TIGR00051
L2_013_122G1_scaffold_42_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25210..26145
DNA (936bp) protein (312aa)
stp; serine/threonine phosphatase stp (EC:3.1.3.16)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17424.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_42_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26142..27368
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FZG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17425.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
protein kinase
L2_013_122G1_scaffold_42_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27380..28060
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17426.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_42_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28053..29504
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0F0Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG34896.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_013_122G1_scaffold_42_27
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29498..29959
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14300.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_42_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29937..30464)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6G2W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG34898.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_122G1_scaffold_42_29
unknown

Not on your lists

30567..30842
DNA (276bp) protein (92aa)

This feature has no annotations

L2_013_122G1_scaffold_42_30
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31303..31521)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BEM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ35299.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Predicted transcriptional regulator
Displaying items 1-30 of 140 in total

View Taxonomy